Effector profile
PlantPEAD ID: PlantPEAD23698 Uniprot ID: A0A3M5TKI9 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 46257 Pathogen type: Bacteria
Species: Pseudomonas avellanae Strain: ICMP 9749 Other name:
Gene name: NCBI Gene ID: RBTX01000324
Entry name: A0A3M5TKI9_9PSED Protein name: Type III effector HopF2
DOI:
Gene/Protein information
Gene sequence:
ATGGGTAATATTTGTGGTACTTCCGGCTCCCATTATGTATATAGTCCGCCAGTAAGCCCTCGACATGTATCGGGTTCGTCCACACCGGTGCACAGTGTAGGCGGTCAAGGCCTAACCTCGGTGTATCAACTTTCCGCTGAGGCACGAGATGATTTTCTTGATCGCTTTGACCCAATGCGAAACCTAGGTCTGAACTCGGAAACGCCGCTTTACAGGACCACGGATACCAGCTGGCGCAATGTTATTGCGCAAGTAAGAAATCCTGACGAAGATCCGCGCATCGACCATCTGCTGACAATGGCAGAAGAAATTTACAAGGCATCAAGCACTTTTAGAAAAAGAATGAACGCAGTTGCGGGCGAAGGTGGTGTCACGATAAGGATCGTGCCAGACAGTGAGATCGGCCATTCCTTTGGGCATGCCGCAACAATACCGGCAACTCGGTCTATTGCCTTGACAGAGACAACAGCAAGCAACGTTCAAGGACGTCACTATCAATCTCTCAATATATTATTGGTTGAACTCTCAAACCTGAGCCGGGCCAATGAAATTGCGGAGATCCGTTCCAGTTTCCAGCAGGGACGAATAGGTCAGCGGCGCGCGGCTCATAACACCGAAAGAGCAGAGTATGGAACGATCGAAGACATGGTCAAATATTTTACGGAGGCTCGACCTGTCATAGAATCACTAGGCTACGGGAATCCGTCGATGTGGTACGCCGCACACGACTACGGCGGCGGAATCGTGCCAGCATACCGATCATTCGAAGATTACTACGCAACAGCGCTTTCAAGCGGCCATACTGACGTTTACCTTAACAACTATTCTCGGTCTGATGAATAG
Protein sequence:
MGNICGTSGSHYVYSPPVSPRHVSGSSTPVHSVGGQGLTSVYQLSAEARDDFLDRFDPMRNLGLNSETPLYRTTDTSWRNVIAQVRNPDEDPRIDHLLTMAEEIYKASSTFRKRMNAVAGEGGVTIRIVPDSEIGHSFGHAATIPATRSIALTETTASNVQGRHYQSLNILLVELSNLSRANEIAEIRSSFQQGRIGQRRAAHNTERAEYGTIEDMVKYFTEARPVIESLGYGNPSMWYAAHDYGGGIVPAYRSFEDYYATALSSGHTDVYLNNYSRSDE
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
30935.2 280 5.8 -0.498 54.73
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.