Effector profile
| PlantPEAD ID: PlantPEAD23804 | Uniprot ID: A0A6A3EAF1 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 53985 | Pathogen type: Oomycota |
| Species: Phytophthora fragariae | Strain: | Other name: |
| Gene name: | NCBI Gene ID: QXGF01001368 | |
| Entry name: A0A6A3EAF1_9STRA | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGTAAAGGAGTTCGTCCGCCTGAGTGAGCTCGGCATTTTCCAATTCGAGTCACCCGCCACCAAGACCAGTCCGGTACCTACCATGAATCTCCGAGGATTCTTTACTGCTGCTGCTGCTGCCATCATCGCTGTCTCGATCGCTACTGCTCAAGCTGAGACCATCGACCACGACCAAGTCGTCCCATTCGCCCAACCTAAAGCTAGCACGATCTCCCAGAAGGCTGCAGTCAAGTTCAAGCCGCAGATCCACATCACCAACGGTTGTCACCCGTACCCCGCTGTCAACGAGGCTGGCCAGACCGGTGGCGGGCTCAAACCCACCGGAGCCCCCAGCAGTTCGTGCAAGGGTTCTGGCTGGGGCTCGCAAGTCTACGGTCGGTCGACCTGGTACAGCGGCCGGTGGGCTATCATGTACTCGTGGTACTTCCGAAGGACTCGCCGTCGACCGGATTGGGTCATCGTCACGACTGGGAGCACGTGGTCGTGTGGATCGACAACCCCGACATCGCCAGCCCAACGATCCTGGCTGCGTCTCCATCCGCCCACAGCGGCTACTCTTACTACGTTCCTCCTAGCTCCGACTCGGTCGACGGCAACAGCGTCAAGGTGA
Protein sequence:
MVKEFVRLSELGIFQFESPATKTSPVPTMNLRGFFTAAAAAIIAVSIATAQAETIDHDQVVPFAQPKASTISQKAAVKFKPQIHITNGCHPYPAVNEAGQTGGGLKPTGAPSSSCKGSGWGSQVYGRSTWYSGRWAIMYSWYFRRTRRRPDWVIVTTGSTWSCGSTTPTSPAQRSWLRLHPPTAATLTTFLLAPTRSTATASR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21968 | 203 | 10.33 | -0.218 | 55.31 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008701
Pfam: PF05630
SMART:
KEGG:
PRINTS: