Effector profile
PlantPEAD ID: PlantPEAD24165 Uniprot ID: I1V8A7 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. tomato strain CFBP4408 Other name:
Gene name: HopAB3 NCBI Gene ID: JQ480306
Entry name: I1V8A7_PSEUB Protein name: AvrPtoB type III effector
DOI:
Gene/Protein information
Gene sequence:
GACCCCGAGCCAGCATCGGGGGGCGCACACGGATCCAGCAGTGGCGCGAGATCCTCGAACAGTCCGCGCTTGCCGGCGCCTCCGGATGCACCCGCGTCGCAGGCGCGAGATCGACGCGAAATGCTTTTGCGAGCCAGGCCGCTGTCGCGCCAAACCAGGGAGTGGGTGGCGCAGGGTATGCCGCCAACGGCGGAGGCTGGAGTGCCCATCAGGCCGCAGGAGTCTGCCGAGGCTGCAGCGCCGCAGGCACGTGCAGAGGAAAGACACACGCCGGAGGCTGATGCAGCAGCGTCGCATGTACGCACAGAGGGAGGACGCACACCGCAGGCGCTTGCCGGTACCTCCCCACGCCACACAGGTGCGGTGCCACACGCCAATAGAATTGTTCAACAATTGGTTGACGCGGGCGCTGATCTTGCCGGTATTAACACCATGATTGACAATGCCATGCGTCGCCACGCGATAGCTCTTCCTTCTCGAACAGTACAGAGTATTTTGATCGAGCATTTCCCTCACCTGCTAGCGGGTGAACTCATTAGTGGCTCAGAGCTCGCTACCGCGTTCCGTGCGGCTCTCCGTCGGGAGGTTCGCCAACAGGAGGCGTCAGCCCCCCCAAGAACAGCAGCGCGGTCCTCCGTAAGGACGCCGGAGCGGTCGACGGTGCCGCCCACTTCTACGGAATCATCATCGGGCAGCAACCAGCGTACGTTATTAGGGCGGTTCGCCGGGTTGATGACGCCTAATCAGAGACGTCCGTCGAGCGCTTCGAACGCGTCTGCCTCTCAAAGGCCTGTAGACAGAAGCCCGCCACGCGTAAACCAGGTACCCACAGGCGCTAACAGGGTTGTGATGCGTAATCATGGTAATAACGAGGCCGACGCCGCGCTGCAAGGATTGGCTCAGCAGGGGGTTGATATGGAGGACCTGCGCGCCGCGCTTGAAAGACATATATTGCATCGCCGCCCGATCCCCATGGATATAGCGTACGCCTTGCAGGGTGTGGGCATTGCGCCAAGTATCGATACGGGAGAGAGCCTTATGGAAAACCCGCTGATGAATTTGAGTGTTGCGCTGCACCGCGCACTAGGGCCTCGTCCCGCTCGTGCTCAAGCGCCTCGTCCAGCCGTTCCGGTGGCTCCCGCGACCGTCTCCAGGCGACCAGATAGCGCGCGTGCCACAAGATTGCAGGTAATACCGGCGCGGGAGGATTACGAAAATAATGTGGCCTACGGAGTGCGCTTGCTGAGCCTGAATCCGGGCGCGGGGGTCAGGGAGACTGTTGCGGCCTTTGTAAACAACCGTTACGAGCGGCAGGCGGTTGTTGCCGACATACGCGCAGCCCTAAATTTATCTAAACAATTCAATAAGTTGCGTACGGTCTCTAAGGCCGATGCTGCCTCCAATAAACCGGGCTTCAAGGATGCGGCGGACCACCCAGACGACGCGACGCAATGCCTTTTTGGTGAAGAATTGTCGCTGACCAGTTCGGATCAGCAGGTGATCGGCCTGGCAGGTAAGGCAACGGACATGTCGGAGTCTTACAGCCGAGAGGCAAATAAGGACCTGGTGTTCATGGATATGAAAAAACTTGCCCAATTCCTCGCAGGCAAGC
Protein sequence:
DPEPASGGAHGSSSGARSSNSPRLPAPPDAPASQARDRREMLLRARPLSRQTREWVAQGMPPTAEAGVPIRPQESAEAAAPQARAEERHTPEADAAASHVRTEGGRTPQALAGTSPRHTGAVPHANRIVQQLVDAGADLAGINTMIDNAMRRHAIALPSRTVQSILIEHFPHLLAGELISGSELATAFRAALRREVRQQEASAPPRTAARSSVRTPERSTVPPTSTESSSGSNQRTLLGRFAGLMTPNQRRPSSASNASASQRPVDRSPPRVNQVPTGANRVVMRNHGNNEADAALQGLAQQGVDMEDLRAALERHILHRRPIPMDIAYALQGVGIAPSIDTGESLMENPLMNLSVALHRALGPRPARAQAPRPAVPVAPATVSRRPDSARATRLQVIPAREDYENNVAYGVRLLSLNPGAGVRETVAAFVNNRYERQAVVADIRAALNLSKQFNKLRTVSKADAASNKPGFKDAADHPDDATQCLFGEELSLTSSDQQVIGLAGKATDMSESYSREANKDLVFMDMKKLAQFLAGK
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
57392.4 537 10.1 -0.518 53.08
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.