Effector profile
PlantPEAD ID: PlantPEAD24171 Uniprot ID: A0A8B3FW86 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. glycinea Other name: Pseudomonas savastanoi pv. glycinea
Gene name: NCBI Gene ID: RBOS01001344
Entry name: A0A8B3FW86_PSESG Protein name: Type III effector HopC1
DOI:
Gene/Protein information
Gene sequence:
ATGACAATCGTGTCTGGACACATCGGAAAACACCCAAGCCTAACCACTGTTCAAGCTGGGTCTTCGGCTTCGGTCGAGAATCAAATGCCTGATCCTGCACAGCTCAGTGATGGACGGTGGAAAAAGCTTCCGACCCAATTATCTTCAATTTCATTGGCGAGATTCGATCAGGATATTTGCACGAATAATCATGGCATCAGTCAGCGTGCAATGTGCTTTGGCCTTTCATTGGGCTGGATTAACATGATTCATGCCGGGAAAGATCATGTTACGCCCTATGCATCGGCAGAAAGAATGAGGTTTCTGGGTTCCTTTGAAGGGGTGGTGCATGCTCGTACTGTTCATAACTTCTATCGGACTGAGCACAAATTTCTGATGGAGCAAGCTTCCGCAAACCCCGGAGTATCAAGTGGCGCGATGGCTGGCACAGAAAGCTTATTGCAAGCTGCTGAGTTGAAGGGGTTAAAGCTTCAACCTGTTCTAGAGGACAAGTCGAACTCAGGCCTACCCTTACTAATTGCGTGTAAGCAGTCAGGGCGGCAGGTGAGCACAGATGAAGCTGCGCTAAGCTCCTTATGTGATGCAATTGTAGAAAATAAGAGAGGGGTAATGGTGATATACAGCCAAGAAATTGCCCACGCTCTGGGCTTTTCTGTATCATCAGATGGCAAAAGAGCGACCTTATTTGATCCCAATCTCGGAGAATTTCATACACGCTCGAAAGCGTTGGCGGATACTATCGAAAACATATCATCGGTAGATGGACTGCCTTTAATCGGCGTTCAAGTATTCGCTTCAAAAATACACTGA
Protein sequence:
MTIVSGHIGKHPSLTTVQAGSSASVENQMPDPAQLSDGRWKKLPTQLSSISLARFDQDICTNNHGISQRAMCFGLSLGWINMIHAGKDHVTPYASAERMRFLGSFEGVVHARTVHNFYRTEHKFLMEQASANPGVSSGAMAGTESLLQAAELKGLKLQPVLEDKSNSGLPLLIACKQSGRQVSTDEAALSSLCDAIVENKRGVMVIYSQEIAHALGFSVSSDGKRATLFDPNLGEFHTRSKALADTIENISSVDGLPLIGVQVFASKIH
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
28914.9 269 6.83 -0.119 43.76
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.