Effector profile
PlantPEAD ID: PlantPEAD24502 Uniprot ID: A0A554GXN4 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 286 Pathogen type: Bacteria
Species: Pseudomonas Strain: sp. ST1 Other name:
Gene name: NCBI Gene ID: VKOF01000021
Entry name: A0A554GXN4_9PSED Protein name: Type III secretion system effector protein
DOI:
Gene/Protein information
Gene sequence:
ATGCATCGTCCTATCACCGCAGGCCATACCACCTCACGTCTCATCCTAGATCAGTTACAACAAATATCACGTACCCCATCGGAAAGTACCGCGCAATCAGCACTTTCTCAGCAAGCAAGCATGAGCAGCCCAGTTTTGGAGCGGTCGAAAAGTGCGCCAGCTTTATTGACTGCGGCACAGCGCACGATGCTTGCACAAGTGGGAGCCTGTAACTCTCATCTGACCTCAGACGAAAACATGGCCATCAATGAACTGAGATTACACAAGCCCCGGTTACCTAAGGATACGTGGTTTTTCACTGATCCTAACAAGGACCCGGATGATGTCGTGACCTACACCTTGGGCAAGCAATTGCAGGCTGAGGGCTTTGTGCACATCACGGACGTAGTGGCAACACTGGGTGATGCTGAAGTTCGCTCTCAACGTGCCGAGATGGCCAAAGGCGTGTTCAACAAGCTTGGGTTGCATGACGTGCATGTGTCGCGTGGTCGGGATTACGCGATGAATTCGCTTCAGTCGAAGGAACATGCCAAATTTTTACTGGAAGGTCATGCTTTAAGGGCTGGACCTGGTGAAATACACCGCGACAGCTTGCAGGACATGAGCAGGCGCTTGGCCCGTGCGCCACATGGAGTCGGTATTGTCGTAATTGCAGGCATGAGTGATATCAATGCTCTCATCACTACCTGCCCGGATATGGTGCGCGAACGGGTTGATGGCATCACCATCATGGGCGGCGTCGAGCCTTTAAAGGACGCAGATGGTTTTGTACAGCCTGATGCACGCGCTTACAACAATGCGACCGACATGGATGCTGCGCGCAGTCTTTATCGGAAAGCGCAGGAGCTTGGCATTCCACTTCGTATAGTGACAAAGGAGGCGGCCTATAAAACGGCGGTTTCGCCTTCATTTTACGAAGGGATAGCGGGGAGCGGACATCCAGTAGGCCACTACCTGAGAGACGTTCAGAAGAGTGCGTTGAAAGGCCTCTGGGAAGGTATTCAAGCTGGATTGCTTCCCGGGTTGGATGACTCATGGTTCTTTCGGACGTTCATGCCGAATGCACAGATTGAAGCAGCACAACTGGATAAAAATAAAGAGAGTTCGTTTGAAGATATCTGGCCTAAGGTGACGAAGCTAAACCTGTATGATCCTCTGACATTACTGGCCTCAGTGCCAGGGGCGGCAAAACTGCTATTTAAACCAAAAGCTATACACACAGAAGGATTTGGTGTTGTAGAGCAAGTAGGTCCAGATGATGTGACGCATCCAGAGAAAGCAAGGTTATTGATGTCCGCTTTAGCCAAATCTGCGCTTGCCCAGTCGACGGTAGCCCCAGATTGA
Protein sequence:
MHRPITAGHTTSRLILDQLQQISRTPSESTAQSALSQQASMSSPVLERSKSAPALLTAAQRTMLAQVGACNSHLTSDENMAINELRLHKPRLPKDTWFFTDPNKDPDDVVTYTLGKQLQAEGFVHITDVVATLGDAEVRSQRAEMAKGVFNKLGLHDVHVSRGRDYAMNSLQSKEHAKFLLEGHALRAGPGEIHRDSLQDMSRRLARAPHGVGIVVIAGMSDINALITTCPDMVRERVDGITIMGGVEPLKDADGFVQPDARAYNNATDMDAARSLYRKAQELGIPLRIVTKEAAYKTAVSPSFYEGIAGSGHPVGHYLRDVQKSALKGLWEGIQAGLLPGLDDSWFFRTFMPNAQIEAAQLDKNKESSFEDIWPKVTKLNLYDPLTLLASVPGAAKLLFKPKAIHTEGFGVVEQVGPDDVTHPEKARLLMSALAKSALAQSTVAPD
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
48680.4 447 6.58 -0.277 46.47
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.