Effector profile
PlantPEAD ID: PlantPEAD24712 Uniprot ID: C1IED4 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 554 Pathogen type: Bacteria
Species: Pectobacterium carotovorum Strain: subsp. carotovorum strain ATCC 15713 Other name: Erwinia carotovora subsp. carotovora
Gene name: HrcV NCBI Gene ID: EU561330
Entry name: C1IED4_PECCC Protein name: HrcV
DOI:
Gene/Protein information
Gene sequence:
ACTGATCGATGTGCTGATCGCGCTCAATATCTGCGTCTCTTCCCTGTTGATCGTGCTGGCAATGTATCTGCCCAAGCCGCTGGCTTTCTCGACGTTTCCGGCCGTGCTGCTGCTGACCACTATGTTCCGGCTGGCGATCTCCATTTCCACCACGCGCCAGATTCTGCTCCAGCAGGACGGTGGCCATATCGTCGAAGCCTTCGGTAACTACGTGGTGGGCGGCAATCTGGCGGTCGGTCTGGTTATTTTCCTGATTCTGACGGTGGTGAACTTTCTGGTGATCACCAAAGGCTCCGAGCGCGTGGCCGAGGTGGCGGCGCGCTTCACGCTGGATGCGATGCCCGGTAAACAGATGTCCATCGACAGCGATTTGCGTGCCGGATTAATCGAAGCCCATCAGGCACGGCAGCGGCGGGAAAATCTGGCGAAAGAAAGCCAGCTATTCGGGGCGATGGACGGCGCGATGAAGTTCGTTAAAGGCGATGCCATTGCATCGCTGGTGATCGTGTTCATCAACATGATCGGCGGCTTCGCCATCGGCGTGTTGCAGCACAACATGGCCGCGTCCGATGCGATGCACGTCTACTCGGTCTTGACCATCGGCGACGGTCTGATCGCCCAGATTCCGGCCCTGCTGATCTCGCTGACCGCCGGGATGATCATCACCCGCGTCTCAGCCGACGGGCAAAAAGTGGATGCCAATATTGGCCGCGAAATTGCCGAACAGCTCACCAGCCAGCCCAAAGCGTGGATCATCTCCTCCATCGGCATGTTTGGCTTTGCGCTGCTGCCGGGAATGCCGACGCTGGTGTTTGTCACCATCAGTCTGGCCTCGCTCGGCAGCGGTCTGTTTCAGCTCTGGCGCATCAAACAACAGGGCCAGCTCGATGCCAACCAGTTGGAAGCGGACAATATGCCCGCTGAACAGAACGGCTATCAGGATCTGCGGCGCTTCAACCCCACGCGCGCCTATTTGCTGCTGTTTCATCCGGTCTGGCAAGGGCAGCCAACGGCGACGGCGCTGGTGCAGAATATCCGCCGCCTGCGTAACAAGCTGGTCTATCGTTTTGGCTTTACGCTGCCGTCCTTTGATATCGAATTCAGCGATCGGCTAGCGGAAGATGAATTTCAGTTTTGCGTCTACGAGATTCCCTACGTTAAAGCCACGTTTGTCACCGACCGGCTAGCCGTTGCCAGCGGTGCCGTCGAACCGACTGATGCCGCCCTCGCCACACCCGGCCCCACGCTACGGGATGAAAGTCAGTGGCTCTGGCTACCGCTGGCACATATCGCACAGCAGCCCGACGACGTGCCGCGCTGGACGGCGGATGAGCTGATTCTGGCGCGCATGGAACAGGCCATTCACCGCACCGGTTCACAGTTTATTGGTTTGCAGGAAACCAAATCCATTCTGGCCTGGCTGGAGAGCGAACAGCCAGAGCTGGCG
Protein sequence:
LIDVLIALNICVSSLLIVLAMYLPKPLAFSTFPAVLLLTTMFRLAISISTTRQILLQQDGGHIVEAFGNYVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVAARFTLDAMPGKQMSIDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMKFVKGDAIASLVIVFINMIGGFAIGVLQHNMAASDAMHVYSVLTIGDGLIAQIPALLISLTAGMIITRVSADGQKVDANIGREIAEQLTSQPKAWIISSIGMFGFALLPGMPTLVFVTISLASLGSGLFQLWRIKQQGQLDANQLEADNMPAEQNGYQDLRRFNPTRAYLLLFHPVWQGQPTATALVQNIRRLRNKLVYRFGFTLPSFDIEFSDRLAEDEFQFCVYEIPYVKATFVTDRLAVASGAVEPTDAALATPGPTLRDESQWLWLPLAHIAQQPDDVPRWTADELILARMEQAIHRTGSQFIGLQETKSILAWLESEQPELA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
52894.5 482 5.37 0.321 46.68
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.