Effector profile
PlantPEAD ID: PlantPEAD24746 Uniprot ID: A0A0P9SS82 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. lapsa strain ICMP 3946 Other name:
Gene name: NCBI Gene ID: RBNO01000089
Entry name: A0A0P9SS82_PSESX Protein name: Type III effector HopX1
DOI:
Gene/Protein information
Gene sequence:
TCAGGTTGCTCGCGGAGACATACCTTTAGCAGATGCGACGCCTCTGGCTTGCCTGACCACCTTTGGCGCCTGTTGGACGACCGTCTTGATGTCTTGGGCACCCAGCGACATTGCGACTCCGGACGCCTCGATTTCCACCTGCAATGCACGCCGTGGATCGGCATTGTTCAACGTATCACTGACTCGTCGGGCGAACGCATCATCAAGCACCGAGTTTTCTTGTCGATAGCGACCACCTTCAACCGGCGAGACTTGCGCCTGCTGATCAGCAAGACGTTTCTGCAAACGGCTGGTTGCCTGTGTCAGCGCCTTCTCGGCTGTCTCTCGGGTAATCTTGCCTGCTTCGGCTGCCGTTGAAAGCGTGAACGAATCCGTTCGCTCTACCGCGCTCCTGTGTTTGGCAAACCGACTGTCCTCTGCAAAAACGGCAGGACCGTTTGACCAGGGGTCCATGACAATAGGCGAAGAGCCAGCGCTGGAATCGTCCGTTTCAGCCCAGACATGATCTTCCCCGCTCTGCGCAGCCAGATGAATATTTTCATCGCCAGTCCGTCCTTTCTCCTGAGCCAGTGCACCGTAGGCAAAGCTCGCTATACGCGCATGTTCGCCACAGTTGCCCGCACCGAACACCTGACCCGACATGGCAACCAGCACATGCCAGTTCATGTCTTCGTTCTCGGGCATCGGCTCATGACCCGCCGCCTCGGCGTCTTTTCTCAGGCGCCTTGCCGCGAGTGTGCGGGCTCCGCTTTGCAGATGGGTGCGTTGCGCATCCACATCAATATTGCCCCTGCCGAAGGGCAACGCGCGGCGCGCTTCGCCCACTGCTTCATCAGCAGGAATAAGCCCCTTTATTGCGTCCTGGTCCAGCTGACGACGATCAAGCCGACGTAACAGCAGGTAGCCAGGCAATGAAGAGGGTGTCTCAGACAGCGACTGCCCTGCAGACGCAACAGGGGGTAACCGTGTTTTGACTGACGAATAAGGGTAGTTCGGGCGTGCCTCACAGGAGCGGGATTCAGGATGTTCTGATGGACCGCTGTGAGACGCTTCATTCTGCGCTTGGGCCGATGATTGCACGGCCTTTTCAACGGTTTCTGCAGAGGACACTGGTGCGCAGATGCCATGACCAGAACTGTGAATTCTCAT
Protein sequence:
MRIHSSGHGICAPVSSAETVEKAVQSSAQAQNEASHSGPSEHPESRSCEARPNYPYSSVKTRLPPVASAGQSLSETPSSLPGYLLLRRLDRRQLDQDAIKGLIPADEAVGEARRALPFGRGNIDVDAQRTHLQSGARTLAARRLRKDAEAAGHEPMPENEDMNWHVLVAMSGQVFGAGNCGEHARIASFAYGALAQEKGRTGDENIHLAAQSGEDHVWAETDDSSAGSSPIVMDPWSNGPAVFAEDSRFAKHRSAVERTDSFTLSTAAEAGKITRETAEKALTQATSRLQKRLADQQAQVSPVEGGRYRQENSVLDDAFARRVSDTLNNADPRRALQVEIEASGVAMSLGAQDIKTVVQQAPKVVRQARGVASAKGMSPRAT
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
40902.3 382 6.43 -0.583 56.71
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.