Effector profile
| PlantPEAD ID: PlantPEAD24749 | Uniprot ID: A0A0P9JQG5 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. antirrhini strain ICMP4303 | Other name: |
| Gene name: | NCBI Gene ID: LJPT01000157 | |
| Entry name: A0A0P9JQG5_9PSED | Protein name: Type III effector HopH1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATCACTCCGTCTCGATATCCAGGCATCTATATCGCCCCCCTCAGTAACGAACCGACAGCAGCTCACACATTCAAAGAACAACCAGAGGAGGCACTTGACCATATCAGCGCCGGCCCCTCGGGCGATAAGCTATTGCGAAAAATATCCACTCTTGCCAGTCAAAAAGATAGAAAAGTCACGCTAAAAGAGATTGAAATAAATAACCAGTGTTATACCGAAGCTGTTCTGAGCAGGAGGCAGCTTGAAAAGTACGAACCAGAAAACTTTAACGAGAATCGGCACATTGCATCACGGCTATCACGAAAGGGGGCCTTTACCAAAGGTGAGGGAAGCAATGCGATTATTGGCTGGTCACCAGACAAAGCAAGCATACGCTTAAATCAGAATGGCTCACCGCTACACCTTGGAATGGATAACGACGACAAAATCACGACCCTGGCTCATGAGCTCGTTCATGCTCGACATGTGTTAGGTGGCAGCTCCTTAGCGGATGGCGGAGATCGATATAATCCACGTACGGGATCTGGCAAAGAGGAGCTTAGGGCCGTTGGATTAGATAAGTACCGCTATTCACTTACAAAAAAACCGTCAGAGAACTCCATCCGAGCTGAACACGGTCTGCCTCTGCGCATGAAGTACAGGCCACATCAATAG
Protein sequence:
MITPSRYPGIYIAPLSNEPTAAHTFKEQPEEALDHISAGPSGDKLLRKISTLASQKDRKVTLKEIEINNQCYTEAVLSRRQLEKYEPENFNENRHIASRLSRKGAFTKGEGSNAIIGWSPDKASIRLNQNGSPLHLGMDNDDKITTLAHELVHARHVLGGSSLADGGDRYNPRTGSGKEELRAVGLDKYRYSLTKKPSENSIRAEHGLPLRMKYRPHQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24351.4 | 218 | 9.34 | -0.836 | 35.45 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR028208
Pfam: PF14891
SMART:
KEGG:
PRINTS: