Effector profile
| PlantPEAD ID: PlantPEAD24750 | Uniprot ID: A0A0P9VQF5 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 47877 | Pathogen type: Bacteria |
| Species: Pseudomonas amygdali | Strain: pv. mori strain ICMP4331 | Other name: |
| Gene name: | NCBI Gene ID: LJQU01000036 | |
| Entry name: A0A0P9VQF5_PSEA0 | Protein name: Type III effector HopH1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTATTGATGTGGCTTGTACTTCATGCGCAGAGGCAGCCCGTGTTCTGCACGGATGGAGTTCTCTGAAGGTTTTTTTGTAACTGAATAACGATAATTATCTAGTCCAGCGGCGCGGAGCTCCTCTTTGCCAGAGCCAGTGCGTGGATTATAGCGATCCCCGCCATCGGCTAACGAGCTGCCACTTAAAATATGTCGAGCATGAACGAGCTCATGAGCCAAGGTCGTAATCTTGTCCACATTGTCCATTCCAAGGTGCAAAGGCGAGCCATTCTGATTTAAGCGGATGCTTGCTTTGTCTGGCGACCAGCCGATAATCGCATTACTTCCTTCGCCCTTTGTAAAGGTCCCCTTTCGTGAAAGGTGTGATGCAATGAACGTATTTTCGTCATGATTTTTTGGTGTGTACTTTTCCAGCTGTCTCCTGCTCAGAACGGGTTCCGTATAGCACTGGTTATTTATTTCAATCTCTTTTAGGGTAATCTTTCTTTCTTTTTGGCTGTTAAGGGTGGATATTTTTCGCAACAGCTTATCGCCAGAGGGACCGGCGCTGATAAGGTCGAGTGCCTCCTCTGCCTTTTCTTTGAATGCGTGCGCTGCAGCAGGATCATTGCTAAGAGGTGCAATATAGATGCCTGGGTATCTCGATGAAGTAATCAT
Protein sequence:
MITSSRYPGIYIAPLSNDPAAAHAFKEKAEEALDLISAGPSGDKLLRKISTLNSQKERKITLKEIEINNQCYTEPVLSRRQLEKYTPKNHDENTFIASHLSRKGTFTKGEGSNAIIGWSPDKASIRLNQNGSPLHLGMDNVDKITTLAHELVHARHILSGSSLADGGDRYNPRTGSGKEELRAAGLDNYRYSVTKKPSENSIRAEHGLPLRMKYKPHQ
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24186.3 | 218 | 9.4 | -0.749 | 30.66 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR028208
Pfam: PF14891
SMART:
KEGG:
PRINTS: