Effector profile
| PlantPEAD ID: PlantPEAD25056 | Uniprot ID: A0A0W8DQC6 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 4790 | Pathogen type: Oomycota |
| Species: Phytophthora nicotianae | Strain: race 1 | Other name: Brown rot and root rot of citrus agent, buckeye rot agent, pineapple heart rot agent, pistachio foot rot agent, sesame blight agent |
| Gene name: | NCBI Gene ID: LNFP01000064 | |
| Entry name: A0A0W8DQC6_PHYNI | Protein name: DEAD-box ATP-dependent RNA helicase 28 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCTACAATTTCCGGAGATGCGTCTGCAGATTTGTCTGCAGAATCACCGAAACATGGCGAGGAGCGTTACACACGTGATCGTGAACAGGAGGCATTAGTAAAGAATGAGTTCAACATAAGCAGCAGCGATGAGGATGAAGAAGATAGATCGCAAACCTCTGTTGGAGACGATGGCACGGATGAAGACGCGTCTAAAACGGGTAAGCGCGTGGAAATACGGCTTAATCCCAAAGCGCGGAAGGTTGGACGACCGCAGAAGCAGAAGAAGAAGACTGCTGCAGGGGAGAAGAAGGACCGCAGGTGGTACGAAACAACGGAGGCCGCTCGAGCACAGGCTGGAGAAGTTTCACTACTTGCGCTTGTTGATTCTCTCGATAGAGAGCAGCCTGGGCTCAAGGAGACGCAAGGACGCCTGTCAGGTGTCATTGTGAAACATGGTGAAGCTGAAAAAAAGAAGCCAAAGCTGAAACTTATGAAGAACCCAGTGTTAACTATGGATCCCATCTATCTGCTTCCTACCAAGCTTCTGGACGCCTGCGTGAAGTTGCTGCCCACGGAGGACACTGTTATCCGGTGGACGACTCACAACCAAGCCAAACCTCACGCACAGACATTGCAGAAGGCTATGTAG
Protein sequence:
MATISGDASADLSAESPKHGEERYTRDREQEALVKNEFNISSSDEDEEDRSQTSVGDDGTDEDASKTGKRVEIRLNPKARKVGRPQKQKKKTAAGEKKDRRWYETTEAARAQAGEVSLLALVDSLDREQPGLKETQGRLSGVIVKHGEAEKKKPKLKLMKNPVLTMDPIYLLPTKLLDACVKLLPTEDTVIRWTTHNQAKPHAQTLQKAM
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23417.4 | 210 | 8.49 | -0.969 | 39.55 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: