Effector profile
PlantPEAD ID: PlantPEAD25263 Uniprot ID: A0A6A3IX52 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 129364 Pathogen type: Oomycota
Species: Phytophthora rubi Strain: SCRP249 Other name:
Gene name: NCBI Gene ID: QXFV01002513
Entry name: A0A6A3IX52_9STRA Protein name: ZSWIM1/3 RNaseH-like domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
ATGGACGCACGCAGGAGCCACGCAGGGGAGGAACGCACCCCTGTCGACGGCATCGGCAGACGCAGTCAGAGGCGCTTACGCAGTGGTCCTGGTATACTTTGGAAGAGCAGCGGCAGAGAGGTGGACGGCAGCAATACGCCGCACAGCAGCGCTGGTGAAGGAAGCGACGCCCGCGAAGAAGATGCCAGCAAGGATAACAGCGACGGTGTCAACGAGATCCAGACCGTAGAGAAGGTGCCGTCGGATGGCGAGGGCGATGAGAGCCAGAGATCAGCGGATATGTCGGGTGGTAATGTTGGTAATGAAGATGGAGTGGCTGTTGATCCTCCAGAGCAATGGCACGACAGCTGGAAGGCGTGGCAAACTTACTTGGCGGAATACTGTGCTCGGACTATGCAGATTCTTCCTGTTAAGGAGACCATGTCTCGGTCAGAGCGAAACCGACGTCTACAGAAAACGAAGAAAGGTTCTGCTGCGATGCTTCCGGACGGATGTGATCCCTATCAACGGACGTACACATGTACGCATGGATGGCTCAAGCGCAAGTCGCGCAGTGATGGGGGCAGACCGCGCCAGCACATTCGGCTCACGAATTGCCCATTTCGTTTCATTGTGCAGTGGGACGTGAGCAGACTTCAGCTACGAGTGAAGAATGGTTGCTTCCTGCACAATCACCCCGTCTCCAAGGCAGCATACAAGACCAATCCTTCGTCGCGTGGTGTCAAGAACCCGCTGATTGAAGCTCGGGTTGAAGGTATGCAGGCAGTTGGAGCTAGACGATCCCGTATTTACGATTATCTTCTCGCACACGACCAGAACGTTATTCAGAGTGACGTGGACAATATGGTGCGGGAACACGCGTCTTCTGTCGCTACAGTGGACGACAACGAAACTACCACGCAGGAAGTTGCGCTGTTTCCAGCGGCTGATCCCGAAAATGTATCTTCAATTGCTGAGACCGTGGCTGGGGAAACCGGGGTGATCTCCCTCGTCACAGCGCACATGCGACGGATGTACGGCCGATTCAGTGAGCTTCTGCTCGTGGACTGTAGTCATAAGACTAACCGCTACAGCTACCAGCTCTTGCCGTTCATGGCCATGAACGAGTTTGGAGAAGGAGCAGTTGTCCAGCAGTCTTTGCTCGAGGCCAACGGAGACTGGCACATGGATCGAGCTATCGCTCACTTCAAGAGATCCCATCCGACTCGAATTGAAAAGCTGCGCGTCATTGTTGTGGATAAGGACCTCAACGAGATCTGCGTTTTGGAAGCCAACTTTCCGGGTGCGCGGATACTGATCTGCCATTTCCATGCGATCTAG
Protein sequence:
MDARRSHAGEERTPVDGIGRRSQRRLRSGPGILWKSSGREVDGSNTPHSSAGEGSDAREEDASKDNSDGVNEIQTVEKVPSDGEGDESQRSADMSGGNVGNEDGVAVDPPEQWHDSWKAWQTYLAEYCARTMQILPVKETMSRSERNRRLQKTKKGSAAMLPDGCDPYQRTYTCTHGWLKRKSRSDGGRPRQHIRLTNCPFRFIVQWDVSRLQLRVKNGCFLHNHPVSKAAYKTNPSSRGVKNPLIEARVEGMQAVGARRSRIYDYLLAHDQNVIQSDVDNMVREHASSVATVDDNETTTQEVALFPAADPENVSSIAETVAGETGVISLVTAHMRRMYGRFSELLLVDCSHKTNRYSYQLLPFMAMNEFGEGAVVQQSLLEANGDWHMDRAIAHFKRSHPTRIEKLRVIVVDKDLNEICVLEANFPGARILICHFHAI
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
49169 439 6.98 -0.669 52.25
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.