Effector profile
| PlantPEAD ID: PlantPEAD25266 | Uniprot ID: A0A6A3JAQ1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 53985 | Pathogen type: Oomycota |
| Species: Phytophthora fragariae | Strain: SCRP245 | Other name: |
| Gene name: | NCBI Gene ID: QXFW01001404 | |
| Entry name: A0A6A3JAQ1_9STRA | Protein name: SWIM-type domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGGTCCAAGCCTGAGTTTGGAAAGATTTCTTCGTACGACGCTGTACAGATCGACGCCTGTATCCACAAGTTGGTTTATGCGGACTCTGACATTTCGAACGAAGCCGCGCACTTTGCTTTGAAAGGTTTGTGCGAGAGGACCGGACATTCTGGCTTTTTCGACTACTTCGAGAAGAACTGGCACGAATGTCAGGACCGGTGGGTTATGCACCGCCGTGCTGATCTCCCGCACTTTCGGAACCATACCAACAACCGTCTGGAGAGCTTTTTCGGGAAACTGAAGGACGGGGTGGACGGTTCGAAGAGCATGGCGGAGTGTGCTAAGACTTTGGTGGCTTATGATCGCCGAGTAGAGAATGAGTATCGTTATCGTCTTGCGCGCATTGGCCAGTTTGTCCACAGTGGTTACGACGAGGAGATGGCTAACGTTCTACGATTCACAACTCCGTACGTTGCCGGTAAGGTCGCCGAAGAGTATGCTTTCGCGTTGGACCGTTTGGAGACGTACACTTTTCTGCGGGATGACGAGGATGGGCACATATTGCACGTGGATGGGGGGAAGAAGTCTTATGTCTTTCGCGACGACGACTGGCGCTGCGATTGCGAGTTCTCAGTGTCGATGAGGTTGCCGTGCCGCCACGTCATTGCATTTCGCAAGAATGCATCAGCGGAGGGTCCTGTCATTCCTTGGGCAAGTATCGACGAAAGATGGACAAGCCCTCTGAGAGAATTGAAGAAGGTCCGACAGTTTACCTACGAACGCTATTCGAACAAGGATGCCGGGCGTGAAGTTTTGGCAACAATGACTCAAACGCAGCGGTACGCTGAGGCTCTCCGTGTTACGCAGCGCATTGCGTTTGAGCTATCTGACATCGACGAGACCGATGAGTTCCGCCGATCCCTGGACTTTTTGGAGCAGCAGTGGCGCAACTTTAGACAGAAAACGTGCGAGGTCGCCACTCCGAGAGAACCAGGTGAGCCGGGCAAGCGTAGATCAGCAGCACACAACGACTCCGACAGCATCGACGAACTCAAGGACCAAGAAATGAGCAGCGAGGGAGATTCAAGCGAGGACAAGGAGGTTGAAGAAGTTTTGGCGGGGGCACCGACTATACGCCTGAACCCAAAGGCGCGCTAG
Protein sequence:
MRSKPEFGKISSYDAVQIDACIHKLVYADSDISNEAAHFALKGLCERTGHSGFFDYFEKNWHECQDRWVMHRRADLPHFRNHTNNRLESFFGKLKDGVDGSKSMAECAKTLVAYDRRVENEYRYRLARIGQFVHSGYDEEMANVLRFTTPYVAGKVAEEYAFALDRLETYTFLRDDEDGHILHVDGGKKSYVFRDDDWRCDCEFSVSMRLPCRHVIAFRKNASAEGPVIPWASIDERWTSPLRELKKVRQFTYERYSNKDAGREVLATMTQTQRYAEALRVTQRIAFELSDIDETDEFRRSLDFLEQQWRNFRQKTCEVATPREPGEPGKRRSAAHNDSDSIDELKDQEMSSEGDSSEDKEVEEVLAGAPTIRLNPKAR
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 44037 | 379 | 5.74 | -0.806 | 44.9 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR007527
Pfam:
SMART:
KEGG:
PRINTS: