Effector profile
PlantPEAD ID: PlantPEAD25328 Uniprot ID: A0A6A3U4A2 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 53985 Pathogen type: Oomycota
Species: Phytophthora fragariae Strain: Other name:
Gene name: NCBI Gene ID: QXGA01000423
Entry name: A0A6A3U4A2_9STRA Protein name: SWIM-type domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
ATGTCTCGCGAGCAGAGAAACAAGCGGCTGATGTGTACTCAGAAAGGTGCGGATCCCGCACAACTCGTTCCCGCTGGCTACGACCCATACCAACGGACGTACATTTGTTCGCGTGGATGGAAGAAGAGGAAGTCACGGAGCGAGGGCAGCAGACCACGGCAGCATATTCGCCACACGAACTGTCCGTTCCGGTTCGTCGTGCAGTGGAACCTGTCCAGGAAGGAGCTCGAGGTGAAGCACGGCCGGTACGTGCACAACCACCCGGTGTCCGAGCAGGCGTTTGCCACGTATCCGTCGTCACGTAGAGTGGACGATGAACTGATAAGTGCGCGAGTGGGTGGAATGCTAGCGGTGGGGGCGTGTGCCATGCTCATCGAACCATCCACACCGTCCTTTAACTTCACGAAGAAGCGTTCAAGGCGGTTATTGTTTGTCAACTGCAACTACGACGAGATGTCGAATGTTTTACGCTTCACCACTCCTTACGTCGCTGGCCAAGTCGAGGAAGAGTATGCCCTGGCTGTGGACTGTTTCGAAGTCTACACTTTTGTTCGAGATGACGGAGACGAGCATCTGATTCGCGTGCAGGGCGGCAGCAAGCCTCATGAATTCCGGGACGATGTTTGGCAATGCAACTGTGAGTTTTCGGTGTCGATGCGGCTTCCATGCCGCCACGTTATTGCCTTTCACAAGACTGGACCTGCCATTGCGCCTGTGATTCCTTGGACAAGCATCGACGAAAGGAATGTCCGCCAGTTCAGCTACGAGCGCTTCTCCAACAGTGAAGTGGGCGGAGCATCTAAGACTACGATGGCATATTCGCAGCGCTATACCGAGGTTCTTCGCGCCACACAGCTCATTGCCTCGGAACTCGCTGACATCGACGAAGACGACGAGTTCCGCAGAATGCTAGATTTTGTGATGCAACATTGGCGCAACGTCCGCCAGAAAACGAGTGAGATCGCCACTCCGCTGTCGTTGAGTGCGCCTGATAAGCGCAAGTATGTGCCCAAGGTGAAGTACGAAGACGCCGATAGCGTCGAAGAAAAGGCGGACAAGGAAATGAGCAGCGAAGGCGATTCGAGCGAAGATGACCTGGTAGAAGAGCTTCTGTCCACCGCGCCGACGATCCGCTTGAACCCGAAGGCGCGCAAGGTAGGGCGTCCAAAGAAACCCAAGGCGAAGACTGTTGCCAGCGAAAGAGCAGACAGGAAGTGGTTCGAAGCTGCGGAAGCCGGTCGAAAAACCGCTGGAGACGCCACACTAGAACGGGTCCTGGTCAACCTTGGCCTCAGGGTTGATATGACTGCGACGACTCTTCCGAGACGTCGTTTCGAGTTATTCTTCTGCCTAAAGACGGGTCGACTGCTCCCTTTGGAGCCTCTGCCGGCTACTGGACCCCCAGGCGATGATGACGAGGTGAAGCCCGCACCACCAAGCCAAGATCAGAACGAGGAACAGCTTCCAGCAACCCAAGTCGCCCAGTAG
Protein sequence:
MSREQRNKRLMCTQKGADPAQLVPAGYDPYQRTYICSRGWKKRKSRSEGSRPRQHIRHTNCPFRFVVQWNLSRKELEVKHGRYVHNHPVSEQAFATYPSSRRVDDELISARVGGMLAVGACAMLIEPSTPSFNFTKKRSRRLLFVNCNYDEMSNVLRFTTPYVAGQVEEEYALAVDCFEVYTFVRDDGDEHLIRVQGGSKPHEFRDDVWQCNCEFSVSMRLPCRHVIAFHKTGPAIAPVIPWTSIDERNVRQFSYERFSNSEVGGASKTTMAYSQRYTEVLRATQLIASELADIDEDDEFRRMLDFVMQHWRNVRQKTSEIATPLSLSAPDKRKYVPKVKYEDADSVEEKADKEMSSEGDSSEDDLVEELLSTAPTIRLNPKARKVGRPKKPKAKTVASERADRKWFEAAEAGRKTAGDATLERVLVNLGLRVDMTATTLPRRRFELFFCLKTGRLLPLEPLPATGPPGDDDEVKPAPPSQDQNEEQLPATQVAQ
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
56443.9 495 8.54 -0.687 51.87
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.