Effector profile
| PlantPEAD ID: PlantPEAD25385 | Uniprot ID: A0A6A4E171 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 129364 | Pathogen type: Oomycota |
| Species: Phytophthora rubi | Strain: SCRP324 | Other name: |
| Gene name: | NCBI Gene ID: QXFU01001596 | |
| Entry name: A0A6A4E171_9STRA | Protein name: SWIM-type domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCACGATACATACCTTTCGTCGATACTTGCCCAAGGAATGACAGGACCCTCCGCTGATGCATTCTTGCGAAATGCAATGACGTGGCGGCACGGCAACCTCATCGACACTGAGAACTCGCAATCGCAGCGCCAGTCGTCGTCGCGAAAGACATAAGACTTCTTCCCCCCATCCACGTGCAATATGTGCCCATCCTCGTCATCCCGCAGAAAAGTGTACGTCTCCAAACGGTCCAACGCGAAAGCATACTCTTCGGCGACCTTACCGGCAACGTACGGAGTTGTGAATCGTAGAACGTTAGCCATCTCCTCGTCGTAACCACTGTGGACAAACTGGCCAATGCGCGCAAGACGATAACGATACTCATTCTCTACTCGGCGATCATAAGCCACCAAAGTCTTAGCGCACTCCGCCATGCTCTTCGAACCGTCCACCCCGTCCTTCAGTTTCCCGAAAAAGCTCTCCAGACGGTTGTTGGTATGGTTCCGAAAGTGCGGGAGATCAGCACGGCGGTGCATAACCCACCGGTCCTGACATTCGTGCCAGTTCTTCTCGAAGTAGTCGAAAAAGCCAGAATGTCCGGTCCTCTCGCACAAACCTTTCAAAGCAAAGTGCGCGGCTTCGTTCGAAATGTCAGAGTCCGCATAAACCAACTTGTGGATACAGGCGTCGATCTGTACGGCGTCGTCCGAAGAAATCTTTCCAAACTCAGGCTTGGACCGCAT
Protein sequence:
MRSKPEFGKISSDDAVQIDACIHKLVYADSDISNEAAHFALKGLCERTGHSGFFDYFEKNWHECQDRWVMHRRADLPHFRNHTNNRLESFFGKLKDGVDGSKSMAECAKTLVAYDRRVENEYRYRLARIGQFVHSGYDEEMANVLRFTTPYVAGKVAEEYAFALDRLETYTFLRDDEDGHILHVDGGKKSYVFRDDDWRCDCEFSVSMRLPCRHVIAFRKNASAEGPVIPWASIDERYVS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 27844.2 | 240 | 6 | -0.599 | 36.15 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR007527
Pfam: PF04434
SMART:
KEGG:
PRINTS: