Effector profile
| PlantPEAD ID: PlantPEAD25636 | Uniprot ID: W2N5W3 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 4792 | Pathogen type: Oomycota |
| Species: Phytophthora parasitica | Strain: IAC_01/95 | Other name: Brown rot and root rot of citrus agent, buckeye rot agent, pineapple heart rot agent, pistachio foot rot agent, sesame blight agent |
| Gene name: | NCBI Gene ID: KI693652 | |
| Entry name: W2N5W3_PHYPR | Protein name: ZSWIM1/3 RNaseH-like domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCTGTCTGTTGGAGCTAAGCGTTCTCGCATTTACGACTACTTACTGGAGCATGACCAAAACGTGATCCAGGTCGACGTGGATAACCTAGTTCGCGACCATTCTGGCTCTCTCTCTACGCAGGACGACAACGAGGCGACGGCAAGGGAAATTGCTGCTTTGGCTGCGGCCAACCCCGAAAACGTTTCCACTGTATCAGAGACAGATGCAAGTGAAACGGGCGTGATTTCATTGGCAACAGCGCACATGAGGCGAATGTACGGGTGGTTCAGCGAGGTTCTGCTCGTGGATTGTAGCCACAAGATCAACAGGTACAACTACCGGCTCCTTACTTTCATGGGAATGAACGAATTTTGCGAAGGGGCGGTTGTGCAGCAGTCACTCATCGATGCTAATGGAGATTGGCACATGGAGCGGGCTATTGCGCACTCCTAA
Protein sequence:
MLSVGAKRSRIYDYLLEHDQNVIQVDVDNLVRDHSGSLSTQDDNEATAREIAALAAANPENVSTVSETDASETGVISLATAHMRRMYGWFSEVLLVDCSHKINRYNYRLLTFMGMNEFCEGAVVQQSLIDANGDWHMERAIAHS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 16092.9 | 144 | 4.85 | -0.269 | 28.25 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR048324
Pfam: PF21056
SMART:
KEGG:
PRINTS: