Effector profile
| PlantPEAD ID: PlantPEAD25789 | Uniprot ID: F0BDZ9 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 56460 | Pathogen type: Bacteria |
| Species: Xanthomonas vesicatoria | Strain: ATCC 35937 | Other name: |
| Gene name: XopD | NCBI Gene ID: AEQV01000074 | |
| Entry name: F0BDZ9_9XANT | Protein name: Xanthomonas outer protein D | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCATCCGCTGCTTGAATCCCTCCCGCGAAGAAATTCCACGCAAGTGCATGCCGATGCCTCAGTCCATCGGATGCGGGCAGCCGCGTCGACCTCCGAAACCCATACGGATTACTCAGAAATATTAGAACTAATCGGCGCCTATGGCGATAACAAAGACATGCGCGCGCTACAAAGAAGATTTACAGGTTTTTCTCGCTTTTTGGCAGACAGTGGCCTGTCACATGTAAGTGGCAGGCAGATGCTTCAGGAATTGAATGAAGGTCAACGCGACCAAGTCATACATCAAATAATAAGACGAATTGAGCATTCTGCGGATGCTGAATATCGAGAAATTGCGCTGAGCCGACTGGAGACGCAGTGCAGTCGAAACATTGTGCTGAGCCAATGGGCCTTGGATCGCATTGCCCAAGCCAAAGACAAAGCCAAAGCCGAAACCAAGGCCAAAGCCAAAACCACGGCCAAAGCCAAAACCACGGCCAAAACCACGGCCAAAGCCAAAGCCGAAGCCGAAACCACGGCCAAAGCCAAAGCTGAAGCCACAGACGTGGCCCAACGCAAGATCAACGAAATTATAGAATATCTACCAATATATGAAGCATTAGGGAAAGTGCCACCGGCTGTGGCATTCTCTAATTACTTGCATGGTGATGGCTCATTTGGCAAGACGCTACGTAACATCCTTCCATACATCACCCCAGATCAGAAGAAAAGATTTGTTCTAGCAAGCGAGAGGCGCAAACTGACCTTGGCCGCTCAAAGCAAGCCTCTAAAAGGCGTATTCCGGACCCTCCATCAAGACCCAGATTTGCTCCTTGAAATTTCAAGAAAATTCAGCAATAGAGCGTACAGTATCGAAGACGCAAGAAGCGGATATTTATCACAAGCAAGGCTGGAAGAAATGGTCGACCAGGAAACCGGCGAACTGACTCCTCTGGGTGAAGCCGTGATTTCAGGAGCATCCGAAGGCATCCAGGCGGCAATTCGCGCCAATTTCAGACTTCGTTATCAACAACCGGACCTGCCTCCATACAGTCCCACTCAGGCCTTCCATCGGCCAGAAGAAACGTGGCATCCCGATGCTCCGGCGGATTCTTCCTATTCGTCCCTATTGCCGCCCACCCCCTCTGGTGGTTGGCAGTTGCCGCCCACCCCCTATGGCGGTTGGCCGCAGAACGCATCAGGTGAATGGCATCCCGATACTTCGGCGGGTTCTTCCTATCCTGCATGGCCAGCCCAGCCCGAAGCATCGAGTTCCACCTTCGATGATCTCGAGTCCTTGGACTATAGGCAGAACTATGGTTATCGCGAATTCGACCTCAACACCCCCCAGGAAGAAGAGGAGCTTTGGGACTACAGCACGCAGACTCCCGTGGGGCACTCGGCCATGAGTCCCGAGAGGATCGATGTGGACAATCTGCCGTCGCCCCAGGACGTCCCAGACCCCGAGCTTCCTCCAGTGACGGCCACTTCGTGGCTGCAAGATGGACATCTGCGCGCCTACACCGACGACCTCGCTCGTCGATTGAGAGGACAGCCCAATGCCCATTTACTCCACTTTGCCGACTCACAGGTAGTGGCCATGCTGAGTTCCACAGATCCAGACCAGCAGTCCCGCGCACGGCGCCTTCTTGTCGGAGACGAAGCCCCACCTATCGTGTTCCTGCCGATCAATCAGCCCAACGCGCACTGGTCATTGCTCGTCGTCGACCGTCGTAACGAGGACGCCGTTGCAGCCTACTACTACGATTCCATGGCACAGACGCAGCCCCAGCAACGCTACCTTGCCGACATGGCGGCCTACCACCTTGGCCTTGATCATGAGCAAACTCAGGAAATGCCCACCGCGATACAGCCGGACGGTTATTCCTGCGGCGATCATGTGCTGACCGGAATAGAGACGCTGGCTCACAGGGTGATCGACGGCACCTTCGACTACGCGGGCGGCAGAGACCTGCGTGATATCGAACCAGACCGCGGCCTCATCAGGGATCGTCTTGCCCAAGCGGAGCAAGCTCCAGCAGAAAGCAGCGTCAGGCAAGCTCCCGAACGGCCCATCGAACAGAAGAAAAAGAAAAGCAAGTGGTGGAAAAAGTTCTAG
Protein sequence:
MHPLLESLPRRNSTQVHADASVHRMRAAASTSETHTDYSEILELIGAYGDNKDMRALQRRFTGFSRFLADSGLSHVSGRQMLQELNEGQRDQVIHQIIRRIEHSADAEYREIALSRLETQCSRNIVLSQWALDRIAQAKDKAKAETKAKAKTTAKAKTTAKTTAKAKAEAETTAKAKAEATDVAQRKINEIIEYLPIYEALGKVPPAVAFSNYLHGDGSFGKTLRNILPYITPDQKKRFVLASERRKLTLAAQSKPLKGVFRTLHQDPDLLLEISRKFSNRAYSIEDARSGYLSQARLEEMVDQETGELTPLGEAVISGASEGIQAAIRANFRLRYQQPDLPPYSPTQAFHRPEETWHPDAPADSSYSSLLPPTPSGGWQLPPTPYGGWPQNASGEWHPDTSAGSSYPAWPAQPEASSSTFDDLESLDYRQNYGYREFDLNTPQEEEELWDYSTQTPVGHSAMSPERIDVDNLPSPQDVPDPELPPVTATSWLQDGHLRAYTDDLARRLRGQPNAHLLHFADSQVVAMLSSTDPDQQSRARRLLVGDEAPPIVFLPINQPNAHWSLLVVDRRNEDAVAAYYYDSMAQTQPQQRYLADMAAYHLGLDHEQTQEMPTAIQPDGYSCGDHVLTGIETLAHRVIDGTFDYAGGRDLRDIEPDRGLIRDRLAQAEQAPAESSVRQAPERPIEQKKKKSKWWKKF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 78335.3 | 699 | 5.77 | -0.706 | 53.78 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR044613,IPR038765,IPR003653
Pfam: PF02902
SMART:
KEGG:
PRINTS: