Effector profile
| PlantPEAD ID: PlantPEAD25822 | Uniprot ID: A0A6G6JM78 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 66269 | Pathogen type: Bacteria |
| Species: Pantoea stewartii | Strain: NRRL B-133 | Other name: |
| Gene name: | NCBI Gene ID: JACETZ010000001 | |
| Entry name: A0A6G6JM78_9GAMM | Protein name: Type VI secretion system tube protein Hcp | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCTATTGATATATTTTTGAAGATAGACGGGATTGAAGGTGAGTCGCAAAATGCGAATCATAAAAAATGGATTGATGTACTTTCATTTGACTGGGGCGCGCAGCAGCCAGGGAATATGGCCGTTGGCGGCGGTGGGGGAGCAGGTAAAGTAAATTACCGCGATTTAACCGTTGAGGCCTTAATTGATAAAGCCACGCCTGCATTAGTGAAATATTGCGCCAGTGGTAAACATCTGCCGAAAGTTCAGCTGTCCGTTTGCAAGGCGGGTGGACAGGAAGTGGAGTATACCCGCATCACACTTGAGGATGTCCTGGTGACACAGACTGACTTCACCGGCGTCGGGCACGCGTCAACACTGGGTATGCAATATTCCTTTCAGGCCAGCAAAGTGGCACTGGAATACTGGGAACAGGCTTCTCAGGGAACGAAAGCCGCTTCTGTACAGATGGGCTGGGATATTAAACAAAATAAAGAAAACTAA
Protein sequence:
MAIDIFLKIDGIEGESQNANHKKWIDVLSFDWGAQQPGNMAVGGGGGAGKVNYRDLTVEALIDKATPALVKYCASGKHLPKVQLSVCKAGGQEVEYTRITLEDVLVTQTDFTGVGHASTLGMQYSFQASKVALEYWEQASQGTKAASVQMGWDIKQNKEN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17296.5 | 160 | 5.58 | -0.287 | 21.13 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG:
PRINTS: