Effector profile
PlantPEAD ID: PlantPEAD25825 Uniprot ID: A0A8A4K7P4 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 553 Pathogen type: Bacteria
Species: Pantoea ananas Strain: PANS 04-2 Other name: Erwinia uredovora
Gene name: NCBI Gene ID: CP059084
Entry name: A0A8A4K7P4_PANAN Protein name: Type VI secretion system tube protein Hcp
DOI:
Gene/Protein information
Gene sequence:
TTAAATTTCTTTATTCTGTTTGATATCCCAGCCAGATTTTGTTTCAGCGCCTTTCGTACCTTGAGAAGACTGTTCCCAGTAATGCAGATTAACTTTAGACGCCTGAAATAAATAATTAACCATAATAGTGTCGGTATGGCCAACGCCACTAAAATTCGTCTTTGTCACCAAAACGTCTTCAAGCACAATTCGGGAATATTCGATTTGTGAACCGCCTGCCTTACAGATGGACAGCTCAACTTTATTAACGTGCTTACCGCTGGCGCAGAATTTGAGAATCGCTGGAGTGGCTTTATCTATTAACGCCTGAACAGAAAGGTCCTGGAAATTGACTTTACCTGCGCCCCCACCCCCGCCAACACTCATATTGCCGGGTTGTTCAGCTGCCCAGTTAAATGACAACACATCGATCCAGTTTTTGTGATTTGAGTCGTTAGATTCGCCTGTTACACCATCAACTTTCAGAAACATATCAATAGCCAT
Protein sequence:
MAIDMFLKVDGVTGESNDSNHKNWIDVLSFNWAAEQPGNMSVGGGGGAGKVNFQDLSVQALIDKATPAILKFCASGKHVNKVELSICKAGGSQIEYSRIVLEDVLVTKTNFSGVGHTDTIMVNYLFQASKVNLHYWEQSSQGTKGAETKSGWDIKQNKEI
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17339.6 160 6.06 -0.258 29.43
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.