Effector profile
PlantPEAD ID: PlantPEAD25827 Uniprot ID: A0A0H3I4K4 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 1905730 Pathogen type: Bacteria
Species: Pectobacterium parmentieri Strain: SCC3193 Other name:
Gene name: NCBI Gene ID: CP003415
Entry name: A0A0H3I4K4_PECPM Protein name: Hcp1 family type VI secretion system effector
DOI:
Gene/Protein information
Gene sequence:
TTACGCCTCTTTATTCTCTTTGATATTCCATCCCGCACTGCTTTCAGCACCTTTACTGCCGGATGAAGTTTGTTCCCAGTACTGCTGTTTCACTTTTGAGGCCTGGAAGGCATAGGTAATGCCAACAGTATCACCACTGTCAGAGCCAGTGTAGTTAACGGAAGTCACGAGCACATCTTCTAAAGTGATACGAGCATATTCCACTTGTTGACCGCCCGCTTTACAAACCGAAAGTTCAATTTTGGAAAGGTGCTTACCACTTGCGCAATATTTAAGGATTGCGGTAGTTGATTTGTCGATCAACGCATTGACACTCAGGTCGACAAAATTAACCTTACCGGCCCCGCCGCCCCCCCCTACGGACATATTACCAGGTTGGTTAGCGCCCCAGTAAAAGGAATTGATATCCGTCCAGCCGGTGTGGTTAGCGTCTTTAGACTCACCCGTCACACCATCAACTTTTAAAAACATATCAATAGCCAT
Protein sequence:
MAIDMFLKVDGVTGESKDANHTGWTDINSFYWGANQPGNMSVGGGGGAGKVNFVDLSVNALIDKSTTAILKYCASGKHLSKIELSVCKAGGQQVEYARITLEDVLVTSVNYTGSDSGDTVGITYAFQASKVKQQYWEQTSSGSKGAESSAGWNIKENKEA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
16944.8 160 5.33 -0.321 24.4
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.