Effector profile
| PlantPEAD ID: PlantPEAD26009 | Uniprot ID: A0A0K1ZS38 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: Phyl III-seqv23 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: Rip | NCBI Gene ID: LN899821 | |
| Entry name: A0A0K1ZS38_RALSL | Protein name: Type III effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATTCCCAAACGGATCGGCGGGAACAGCCTACCCTCCCTGGCCGGCAACACACCGGCGGACCGCCACGGCGAACCGGCCGCCGCGCCGCCCGCGCCGACGGCACGGACCGCCGGCCAGCAACTGGCCGAGCTGAACACGCCGCGCACCCCGCGCCAGCCGCCCGCGATGGACGTGCTGAAGCGGCGCCGCAAGCCTGAGACGCGGCAGCGGCTGCATCGCCTGCGCAAGGCCCTCGGTGAAATCAGCCCGGCACCGTCGTCGCCAGAACAGGCCTGGGCCGACATTCGCAACGCCATGGCCCGCGCGGATCTCGCCGGCTGGACCCTCCCGGCGCTGTCGGACGAGGCCGCCATCCGCCACGCCGACGGCTCGGTGGAGATCGGCCTGATCTCCCACGCCATCGTGTTCAATCCGGGCGGCGCGTTCCGCATCCTGGATCTGCTATCGCCCGGCAGCCCCTACTTCGAAATGGCCGGGCATGGCGGGATTGCGTTTGTGGCGCCGCGCTGA
Protein sequence:
MIPKRIGGNSLPSLAGNTPADRHGEPAAAPPAPTARTAGQQLAELNTPRTPRQPPAMDVLKRRRKPETRQRLHRLRKALGEISPAPSSPEQAWADIRNAMARADLAGWTLPALSDEAAIRHADGSVEIGLISHAIVFNPGGAFRILDLLSPGSPYFEMAGHGGIAFVAPR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18091.7 | 170 | 10.71 | -0.373 | 58.41 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: