Effector profile
| PlantPEAD ID: PlantPEAD26046 | Uniprot ID: D2Z004 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: RS1000 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: Rip72 | NCBI Gene ID: AB516347 | |
| Entry name: D2Z004_RALSL | Protein name: Type III effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATCATCGGGCCCGATGTCGGAGGGCCTCCGCAACAAGCAGGTATGTTGAAAATCGGTCGTATCACGGGGTTTGCATTGCACGGTGGCGACACGGCAAGCGTGTCGCCACCAAAATCGGAGACGGCGTCGACGGGGAAATCGCGTGCCCCGGCGTTCGCCGGACTCAAGCCCGCGGCCGGTACATTGGAGCCAACCCAGCCGTCGCTCCGCCGGACCGCATCGGTTCGCATGGCGGTTTCCGATGACGCCGAGCCTCACCGCCTCGAGCGCACGCTGTCCTGTGCCGGGTCGCTGCAGCGCGCGCCTTTCGGCTTCGATCCGCAGAAGTACCGGGCACGGCACGGCAAGACCCTGACGGAAAAGTACGGCAGCCGGCAGCCGGCGCGCGCCAAGTCCGGCAAAAAAGCGATCCAGCCCGATGAACGGGAGAAGCTGCCCGATGGCTGGTGGCGTACCCGGGTCAATCCCACCCGCATCCTGGTGACATCGACCGGCATCCAGACCCAGGCCGATATCGAGCACTGCGGCCTGACCAAGGATGCGCAGGCGGAGCCCCGCAGCCTTGACCAGCTGATCGACGTGGCGCGGCTGCGCAACGAGCCGCGCAAGTTCCAGTACAAGCGGGACATGTCCGTCAATGGCACCTTCATCATCGGGAACATCCACGTGCAGAAGCCGGACGGCAAGGGTGTGCATCATCTGGGGCATCCGACGCTCGTCGGCGGTCGCCGGATACCGGAGGCGCGCATCAGCAGCATGCTCTATGCGGACGAGACGGGACGCCTGATCATCAACAACGACTCCGGGCGATTCAGCGAATACCCCGATCGCGATCCATCGCAACTGGAAGCGGTTGCCGCGTTCCTGAAGCGGCACGGGCTCATCGTTGCGGTGGAATGGATCGACATGCAGAACGGAAAGGCCAAGAAGCGCCCACCCATTCCGCTGGTCAACGATCCGCAGCTCGACTGGTGA
Protein sequence:
MIIGPDVGGPPQQAGMLKIGRITGFALHGGDTASVSPPKSETASTGKSRAPAFAGLKPAAGTLEPTQPSLRRTASVRMAVSDDAEPHRLERTLSCAGSLQRAPFGFDPQKYRARHGKTLTEKYGSRQPARAKSGKKAIQPDEREKLPDGWWRTRVNPTRILVTSTGIQTQADIEHCGLTKDAQAEPRSLDQLIDVARLRNEPRKFQYKRDMSVNGTFIIGNIHVQKPDGKGVHHLGHPTLVGGRRIPEARISSMLYADETGRLIINNDSGRFSEYPDRDPSQLEAVAAFLKRHGLIVAVEWIDMQNGKAKKRPPIPLVNDPQLDW
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 35688.6 | 325 | 9.9 | -0.639 | 38.9 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: