Effector profile
| PlantPEAD ID: PlantPEAD26193 | Uniprot ID: C9SIQ7 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1051613 | Pathogen type: Fungi |
| Species: Verticillium alfalfae | Strain: strain VaMs.102 / ATCC MYA-4576 / FGSC 10136 | Other name: Verticillium wilt of alfalfa,Verticillium albo-atrum |
| Gene name: | NCBI Gene ID: DS985218 | |
| Entry name: C9SIQ7_VERA1 | Protein name: Extracellular cell wall glucanase Crf1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCCATTGACGTCGACTTTGCCAACGGCGCCGTCGATACCTTTATCGAAGCCGGCTCGCCGACCTACGGCCGCGACGGCGTCAGCTTCACCGTCGCCGCCTCGGGTCAGGCCCCGCAGCTCATGTCGCTCTTCTACATCATGTTCGGCCGCGTCGAGATCACACTCAAGGCGGCCCCCGGCGCCGGCATCGTCTCCTCTCTCGTCCTCCAGTCCGATACGCTCGACGAGATCGACTTTGAGTGGCTCGGCGCCGACCCGCACGAGGTCCAGACCAACTACTTCGGCAAGGGCCAGGTCACCATAGCGGACAGCCTGAACGCCCTGGAATTCGAGAACCCATAG
Protein sequence:
MAIDVDFANGAVDTFIEAGSPTYGRDGVSFTVAASGQAPQLMSLFYIMFGRVEITLKAAPGAGIVSSLVLQSDTLDEIDFEWLGADPHEVQTNYFGKGQVTIADSLNALEFENP
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 12151.6 | 114 | 3.9 | 0.167 | 25.72 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013320,IPR000757
Pfam: PF00722
SMART:
KEGG: val:VDBG_04939
PRINTS: