Effector profile
| PlantPEAD ID: PlantPEAD26195 | Uniprot ID: A0A2J8C4K7 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 27337 | Pathogen type: Fungi |
| Species: Verticillium dahliae | Strain: 12008 | Other name: Verticillium wilt |
| Gene name: | NCBI Gene ID: MPSH01000014 | |
| Entry name: A0A2J8C4K7_VERDA | Protein name: GH16 domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTTCTTCGCAAGAACAAGGAGCCCCGCAACCTTGGCAGCGGCAGCGGCAGCAGCATTCTCAACATTGACAGCGGCCCAGACATGGACGGATTGTAACCCTCTGACAACAACATGCGAACCTAACACGGCGCTCGGCATGGCCATTGACGTCGACTTTGCCAACGGCGCCGTCGACACCTTTATCGAAGCCGGCTCGCCGACCTACGGCCGCGACGGCGCCAGCTTCACCGTCGCCGCCTCGGGCCAGGCCCCGCAGCTCATGTCGCTCTTCTACATCATGTTCGGCCGCGTCGAGATCACACTCAAGGCGGCCCCCGGCGCCGGCATCGTCTCCTCCCTCGTCCTCCAGTCCGACACGCTCGACGAGATCGACTTTGAGTGGCTCGGCGCCGACCCGCACGAGGTCCAGACCAACTACTTTGGCAAGGGCCAGGTCACGTCCTACAACCGCGGCCAGTTCCACAAGATGGACAAGAACAACCAGGACGAGTTCCTCACCTACGTCTTCGACTGGACCAAGGACCGCACCGAGTTCTACGTCGACGGCACCCTCGTCCGCACCCTGACCCCCGCCGACGCCGACGACAACCAGTACCCCCAGTCCCCGATGCAGGTCCGCTTCGGCGCCTGGTCCGGCGGCGACCCGGCCAACGCCCCCGGCACCATCGCCTGGGCCAAGGGTCCCACCGACTTCGCCCAGGGCCCCTTCAGCATGGTCGTCCGCGACCTCAAGGTCATCGACTACTCCACCGGCAAGCAGTACAAGTACACCGACAACTCGGGCAGCTGGCAGTCCATCGAGGCCGTCGGCGGCACCGTCAACGCCAACGAGGGCAACGCCGACCAGGTCGCCGTCACCGCCACCGCCGCCGCCGAGACGGGCGGGCCCGCCCCCACCGTGCCCCCCGGCGGCATCGGCACCGACGAGGCCACCGCCCAGCAGACCGGCTGGCCCTGGGACGCCGCCGACAGGCCCAACGGCGGCTCCGTGCCCGAGGGCTGGCGCATCACCGAGGAGGGCAAGCTGCGCGCCATTGGCGCCGGCGCCTCGCTGCGCCCGCACGTGCTGCTCCTGGCCCTGTCCTTCTTCGCCGGCGTCGTGGCTGTCGTCAGGAGGTGA
Protein sequence:
MFFARTRSPATLAAAAAAAFSTLTAAQTWTDCNPLTTTCEPNTALGMAIDVDFANGAVDTFIEAGSPTYGRDGASFTVAASGQAPQLMSLFYIMFGRVEITLKAAPGAGIVSSLVLQSDTLDEIDFEWLGADPHEVQTNYFGKGQVTSYNRGQFHKMDKNNQDEFLTYVFDWTKDRTEFYVDGTLVRTLTPADADDNQYPQSPMQVRFGAWSGGDPANAPGTIAWAKGPTDFAQGPFSMVVRDLKVIDYSTGKQYKYTDNSGSWQSIEAVGGTVNANEGNADQVAVTATAAAETGGPAPTVPPGGIGTDEATAQQTGWPWDAADRPNGGSVPEGWRITEEGKLRAIGAGASLRPHVLLLALSFFAGVVAVVRR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 39610 | 373 | 4.54 | -0.2 | 29.26 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013320,IPR000757
Pfam: PF00722
SMART:
KEGG:
PRINTS: