Effector profile
| PlantPEAD ID: PlantPEAD26282 | Uniprot ID: A0A2N5SCY3 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 27344 | Pathogen type: Fungi |
| Species: Puccinia coronata | Strain: f. sp. avenae strain 12NC29 | Other name: |
| Gene name: | NCBI Gene ID: PGCJ01001032 | |
| Entry name: A0A2N5SCY3_9BASI | Protein name: RlpA-like protein double-psi beta-barrel domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAATTCTACTCGTCTTCAACTCCTGATCCTAGTCTCTGCCGCACAACTTATGAATTCTTGTCGCCATGCATCTGCTATGACACATGATGCATCGTTAAAAAATCCCTCCTATTCGAGCACATTGCATACTCTCCAAACCCGAGCGGACGGAAGAATGGACGAAAACCCATCCTTAGCTTGGACGGGATCCGGCACCGGGGATGTGGAGGATGAATCTTCGGCGACCGAAATGAATTATCAGGCCAAACAGAACGTCACTTTATCGGAACGTGGTCGTAGACACCGGGAAGACGATGCCCCAATCAAAAGCCTATTGGGAAATGCAGTCGGTTTAGGTATACTTGGTGGATCCGATGATGAAGATAATGGTGAGATGGTCTTCAAGGGAGGCTGGGCGACATACTTTACCCAAAATATGATACCAGGAGCTTGCGGAAAGGTACACCAAGACAGCGATATCATCGTTGCCATAGACTACCGGAGGTACGGCGCGTTGAACAAAGTATCGAGATATTGTGGCAAGAAAGTTAGCATTACTAGTGGACATACAACTATCACAGCTACTGTCGCCGATGCTTGCCCTACCTGCTTGAATCGGAACTGCTTGGATCTAAGCGAAGGTGCTTCCAAGAAGTTGGGCATAACCGTCGAAGAGGGAATGAAGCCAATCACCTGGAAGTTTATCGATTAA
Protein sequence:
MNSTRLQLLILVSAAQLMNSCRHASAMTHDASLKNPSYSSTLHTLQTRADGRMDENPSLAWTGSGTGDVEDESSATEMNYQAKQNVTLSERGRRHREDDAPIKSLLGNAVGLGILGGSDDEDNGEMVFKGGWATYFTQNMIPGACGKVHQDSDIIVAIDYRRYGALNKVSRYCGKKVSITSGHTTITATVADACPTCLNRNCLDLSEGASKKLGITVEEGMKPITWKFID
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24908 | 230 | 6.07 | -0.41 | 30.9 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036908
Pfam:
SMART:
KEGG:
PRINTS: