Effector profile
| PlantPEAD ID: PlantPEAD26364 | Uniprot ID: M5BYH0 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1108050 | Pathogen type: Fungi |
| Species: Thanatephorus cucumeris | Strain: AG1-IB / isolate 7/3/14 | Other name: Rhizoctonia solani |
| Gene name: | NCBI Gene ID: CAOJ01009615 | |
| Entry name: M5BYH0_THACB | Protein name: RlpA-like protein double-psi beta-barrel domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCCGTTATCTTTCCATTGGTGCGTTGCCCCTGGAAGAAGAAGAACGACGATGCTTCCTTCAAGCAGTGTTGTCACCCCTTGCAGAAGGATGGTGGTTCGGTCTCGGCTGCATGCACTGCTCCCGCTCAAACCAACACCTCTCCGGGTGAACAGCAGCCCACCTCTTCGAGTTCGTATGCTCCCGCCGCGACCCCCACCTCCAGCAACTCCGGTTCCGAAACTTATACAGGAGGACATGGTACCTATTTTTATCAAAATGGTGTAGCAGGAGCATGTGGTACCGTCCACAACGATAATGACAATATCGTTGCTGTTGACTACCGACGTTACGGCGATCTTAGCAAGCAGTCTGACCTTTGCGGCAAAAAGGTCCTCGTCACTAATACAAACAACGGCAAGAGCGTCGTTTGCACTGTCGCGGATGCTTGCCCTACCTGTGACAACGGCAACTCGTTGGATCTTTCCGAAGGAGCTTTCAAATCCCTCGCTAGTTTGGATGAGGGCCTGATTCCTATCAAATATACTATACTTTAA
Protein sequence:
MSVIFPLVRCPWKKKNDDASFKQCCHPLQKDGGSVSAACTAPAQTNTSPGEQQPTSSSSYAPAATPTSSNSGSETYTGGHGTYFYQNGVAGACGTVHNDNDNIVAVDYRRYGDLSKQSDLCGKKVLVTNTNNGKSVVCTVADACPTCDNGNSLDLSEGAFKSLASLDEGLIPIKYTIL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18656.7 | 178 | 5.85 | -0.394 | 46.31 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR009009,IPR036908
Pfam: PF03330
SMART:
KEGG:
PRINTS: