Effector profile
| PlantPEAD ID: PlantPEAD26365 | Uniprot ID: M5BZW1 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1108050 | Pathogen type: Fungi |
| Species: Thanatephorus cucumeris | Strain: Isolate 7/3/14 | Other name: Rhizoctonia solani |
| Gene name: LbRaf1 | NCBI Gene ID: CAOJ01011146 | |
| Entry name: M5BZW1_THACB | Protein name: RlpA-like protein double-psi beta-barrel domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCAGTCTTCTTTCCTCTCCATCATTCTCACTTTCCTCTCGATCTCGCTCCTCGTGCTCGCTGCCCCTGCTGCTGTCACCACTCCGGGTCTCGTCCCTGCTGTGTTTCCACCTGCTGGGGTTAAGTTGTACAATGCGACCGCCGGATACAACGCAACGCACGGACTTCCCTACGAAAAGAAAACTCACGGCCCACTAACCGAGCGTGACCTACAAGCTCGTCAGGCGTTCAGCGGCGATGCAACCTGGTTCCACACCGGCCTTGGCGCATGCGGAGGTTTCAACTACGACTATGAGTACGTCGTCGCGCTCAACCAGCCGCAATGGAGTGGCGGAGCGAACTGCTGGCGCGGAATCACCATCCAGGCTTACGGCAAACAGGTGAACGCAGCGGTCGTCGACCTGTGTCCCAGCTGCGCATGGGGATCGCTGGATCTAACTCCAGGACTTTTCCAAGCGTTCACGAGCCTGGACGTCGGAAGGTTCGGAATTACCTGGTGGTACCGGTAA
Protein sequence:
MQSSFLSIILTFLSISLLVLAAPAAVTTPGLVPAVFPPAGVKLYNATAGYNATHGLPYEKKTHGPLTERDLQARQAFSGDATWFHTGLGACGGFNYDYEYVVALNQPQWSGGANCWRGITIQAYGKQVNAAVVDLCPSCAWGSLDLTPGLFQAFTSLDVGRFGITWWYR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18212.8 | 169 | 6.8 | 0.18 | 29.07 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036908
Pfam:
SMART:
KEGG:
PRINTS: