Effector profile
| PlantPEAD ID: PlantPEAD26367 | Uniprot ID: M5C1F8 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1108050 | Pathogen type: Fungi |
| Species: Thanatephorus cucumeris | Strain: AG1-IB / isolate 7/3/14 | Other name: Rhizoctonia solani |
| Gene name: LbRaf3 | NCBI Gene ID: CAOJ01011146 | |
| Entry name: M5C1F8_THACB | Protein name: RlpA-like protein double-psi beta-barrel domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCAGTTCTCTTTTGTCTCTATCGCTATCTCTCTCCTCGCTTCCTCTCTCTTCGCTCTTGCTGCTCCTGCTGCTCCTGCTGCGCTAGTCCCAGCACACACTCCACCTGTTGGCGTCAAGCTGTACAACGCAACCGCAGGCTACAACGCCACCCACGGACTTCCCTATAAGACCAACGTCCATGGCCCTTTGACTCAGCGCGACCTGAAGCCTCGTCAGGCATACTCCGGTGATGCCACCTGGTTCTATCCTGGGCTCGGAGCGTGTGGCGGCACTAACAACCAGTGGGAGCACGTCGTGGCACTCAACAGCCCCCAATGGAACAACGGCGCCAACTGCTGGCGTAGTATTACGATCCAGGCGAATGGAAAACAAGTACCTGCTGCGATCGTAGACCTTTGTCCCGAATGCGCATGGGGTTCACTGGATCTAGCTCCTGCATTGTTCCAGCAATTTGCTAGTTTGGATGCCGGCAGGATTGGTATCACTTGGTGGTTCAACTGA
Protein sequence:
MQFSFVSIAISLLASSLFALAAPAAPAALVPAHTPPVGVKLYNATAGYNATHGLPYKTNVHGPLTQRDLKPRQAYSGDATWFYPGLGACGGTNNQWEHVVALNSPQWNNGANCWRSITIQANGKQVPAAIVDLCPECAWGSLDLAPALFQQFASLDAGRIGITWWFN
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17824.2 | 167 | 7.71 | 0.084 | 30.65 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036908
Pfam:
SMART:
KEGG:
PRINTS: