Effector profile
| PlantPEAD ID: PlantPEAD26582 | Uniprot ID: A0A124C4J1 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1930 | Pathogen type: Bacteria |
| Species: Streptomyces scabiei | Strain: S58 | Other name: |
| Gene name: XlnB | NCBI Gene ID: BCMM01000024 | |
| Entry name: A0A124C4J1_STRSC | Protein name: Endo-1,4-beta-xylanase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCACGGGGCCACCGTGATCGAGGAGTTGCCGCTGCTCCGGTACCCCTCGGTGGCCATGATCATGTAATAGCGGAAGGCGCCGAGGGGCATGCCCGCACGGCCCCAGGCGTCGAAGTGGTTGCCGGTGGTGATGGTCCCGCCCGTCCGGCGCGACTGACGGACGCTCCAGTACTGGTCGAAGGTGCGGACTCCCTCGACGGAGGGAGCGTTGTACCGCGTCGTCCGGTAGATGTCGTACGTGCCGCCGTCGCTGTTGACCGTGCCCCGGTAGGTTCCGGTGGGCCGGTAGTTGCCCCAGTTGTCGACGATGTAGTACTCGACGAGCGGGTTGGCCGTCCAGCCGTAGAGAGTCAGATAGGCGTTGCCGGACGGGTTGAACGAGCCGGAGTAGCTCACGGTCCTGCGGGAGCCGTTGCTCCAGCCCTTGCCCGCGACGAAGTTCCCGGTGTTGCTCCAGGAGGTCCGGTAGGTGCCGCCGGAGGCCAGGGTCATGGAGACCGTGCCGGGGGCGTCGGTCCAGAAGGAGTAGTAGAACCCGTTGTCGGTGCCGGTCCGGTTGCTGGTGATGACCGTGTCCGCGTGGGCGGTGCCGGGCAGGGACACCGCGGTCGCGGCGGCCAGCGCGGTCGTGCAGAGTCCGCCCAGGAAGAGCCGGCGGCTCGGGGGCGGGGTGGGAGTGGGTGCGGATGCGTCGTTCAT
Protein sequence:
MNDASAPTPTPPPSRRLFLGGLCTTALAAATAVSLPGTAHADTVITSNRTGTDNGFYYSFWTDAPGTVSMTLASGGTYRTSWSNTGNFVAGKGWSNGSRRTVSYSGSFNPSGNAYLTLYGWTANPLVEYYIVDNWGNYRPTGTYRGTVNSDGGTYDIYRTTRYNAPSVEGVRTFDQYWSVRQSRRTGGTITTGNHFDAWGRAGMPLGAFRYYMIMATEGYRSSGNSSITVAP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 25057.5 | 232 | 9.48 | -0.449 | 28.62 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013320,IPR013319,IPR018208,IPR033119,IPR033123,IPR001137,IPR006311,IPR019546
Pfam: PF00457
SMART:
KEGG:
PRINTS: PR00911