Effector profile
| PlantPEAD ID: PlantPEAD26614 | Uniprot ID: A0A4U2PWC2 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 159743 | Pathogen type: Bacteria |
| Species: Paenibacillus terrae | Strain: PIC167 | Other name: |
| Gene name: | NCBI Gene ID: PNXQ01000012 | |
| Entry name: A0A4U2PWC2_9BACL | Protein name: Endo-1,4-beta-xylanase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTTTAAGTTTAGTAAGAAAATGATGACGGTAGTTCTTGCAGCTTCCATGAGTTTTGGGTTGTTTGCAACAACCTCAAGTGCAGCGACAGACTATTGGCAAAATTGGACTGATGGCGGCGGGACAGTCAATGCTGTCAATGGATCAGGCGGTAATTACAGCGTGACATGGCAAAATACCGGGAATTTTGTTGTCGGCAAAGGCTGGACTACTGGATCGCCAAACAGAACGATTAACTACAATGCCGGTGTCTGGGCGCCGTCCGGTAATGGATATTTGGCTCTCTACGGGTGGACTAGAAACGCACTCATCGAATATTACGTCGTTGATAGCTGGGGTACTTATCGACCTACCGGAACGTATAAAGGTACGGTGACCAGTGATGGGGGCACATATGACATCTACACAACAATGCGATACGACGCACCTTCAATTGAAGGCCAAAAAACGACGTTTATTCAGTACTGGAGTGTTCGACAGTCGAAGAGACCGACCGGGGGCAACTCCACGATCACTTTCAGCAACCACGTGAACGCATGGGCGAGCAAAGGAATGCATCTGGGGAATAACTGGTCTTACCAGGTGTTAGCAACAGAGGGGTATCAGAGTAGCGGGAAATCTGACGTAACGGTGTGGTAA
Protein sequence:
MFKFSKKMMTVVLAASMSFGLFATTSSAATDYWQNWTDGGGTVNAVNGSGGNYSVTWQNTGNFVVGKGWTTGSPNRTINYNAGVWAPSGNGYLALYGWTRNALIEYYVVDSWGTYRPTGTYKGTVTSDGGTYDIYTTMRYDAPSIEGQKTTFIQYWSVRQSKRPTGGNSTITFSNHVNAWASKGMHLGNNWSYQVLATEGYQSSGKSDVTVW
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23248.7 | 212 | 9.3 | -0.429 | 22.85 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013320,IPR013319,IPR018208,IPR033119,IPR033123,IPR001137
Pfam: PF00457
SMART:
KEGG:
PRINTS: PR00911