Effector profile
| PlantPEAD ID: PlantPEAD26626 | Uniprot ID: A0A0G4LPW8 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 100787 | Pathogen type: Fungi |
| Species: Verticillium longisporum | Strain: VL1 | Other name: |
| Gene name: | NCBI Gene ID: CVQI01005335 | |
| Entry name: A0A0G4LPW8_9PEZI | Protein name: Endo-1,4-beta-xylanase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCTCAAATCTCTAGTCGTCTTGCTCTTCACGAGCCTTGTCGCAGCCTTTCCCACCCTCGACACCGACCAGATTGCGGCCCTCCACAAACGCCAGGCGACCCCAAACTCGCAAGGTACACATGGCGGGTTCTTCTACTACTGGTGGAGCAACGGCCAAAGCCCGGCGGCATACACCAACCTGGACGGCGGCAGCTACCGTCTCCGGTGGGAAAGCGGCGGGAACCTGATCGGCGGCAAAGGATGGAACCCTGGGACTGACAACAGGACGATACAGATTTCTGGAAATTACCAGGGTGTTGGAAATAGCTACCTTGCCGTCTACGGCTGGCTTGAGAACCCCCAAGTTGAATACTACATTATCGAGTACCATGGTGTCTTCAACCCGGTCTATGACGCGCAGATTCTTGGCACGGCGATATGCGACGGCAGCGTCTACGACATCAGTCGAAGCACACGCGTGAGCTCTAGCGGGACGAAGATACTGCAGCGGTACTGGTCTATTCGGCGCAACAAGCGGACAGGCGGGACGGTGCAGACAAGGTGTCACTTTGACGCCTGGCGCAGCACGGGACTCACCGCTACGGATCACGGTTTTCAGATTGTCGCGACAGAGGGGTACTTCAGCAGCGGGTTCGCAGAGATGACCGTCGCGGATGCGGGTGCGGAAGAATAA
Protein sequence:
MLKSLVVLLFTSLVAAFPTLDTDQIAALHKRQATPNSQGTHGGFFYYWWSNGQSPAAYTNLDGGSYRLRWESGGNLIGGKGWNPGTDNRTIQISGNYQGVGNSYLAVYGWLENPQVEYYIIEYHGVFNPVYDAQILGTAICDGSVYDISRSTRVSSSGTKILQRYWSIRRNKRTGGTVQTRCHFDAWRSTGLTATDHGFQIVATEGYFSSGFAEMTVADAGAEE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24699.4 | 224 | 6.51 | -0.325 | 43.61 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013320,IPR013319,IPR018208,IPR033119,IPR033123,IPR001137
Pfam: PF00457
SMART:
KEGG:
PRINTS: PR00911