Effector profile
| PlantPEAD ID: PlantPEAD27105 | Uniprot ID: A0A6A3IAK8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 129364 | Pathogen type: Oomycota |
| Species: Phytophthora rubi | Strain: SCRP249 | Other name: |
| Gene name: | NCBI Gene ID: QXFV01003244 | |
| Entry name: A0A6A3IAK8_9STRA | Protein name: Chromo domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGGCTGGGGTGATACCAGCTTCCCGAACGGTACGCCCTCCAATGGGCTGCAGAGCGTCGGTTTGAAGGTTTGGACCAACGCTTGCGGACACGTTTTCAATGTGGACAAATCGTCGGTGTGTGCTGGTGGCACGGCTGGCGAGGATTCATGCCTTGGCGATACTGGCGACCCGCTGATCAAGGAAAAGGGTCGCGATGACGCTGATGACATTGTGATCGGCTTGGTGGGCTGGGGGTATCAATGCGGGTCGTTTTCTCGCCCTCGTATTGACTCGGCTGGTGATACGCGCTGGATCGTGGATCATATTGTTGCGCACGAGGACCCGCCTCGTGCCACGCCTCGTACCCGTGTCCGTACGAGTAGTCCGACCACGCGCGAGATTCCTGCCGCGCGGTGTTACCGGGTGCGTTGGCTTGGGTTTCCATCGGACGATGATACATGGGAGCCACGCTCCACTCTCCTCCGGGATGTCCCGGACGTTGTTCGCGAGGACGAGGACGAGATCGCGACTTTCGCCGACCTTGCGGTGACCGTGAACGCGAACGACCACGCGCCGGCGGAGAAGAGCCCCGCCGAGAACGAGCGCGGCGGCCCCCGCCGCGACTAG
Protein sequence:
MGWGDTSFPNGTPSNGLQSVGLKVWTNACGHVFNVDKSSVCAGGTAGEDSCLGDTGDPLIKEKGRDDADDIVIGLVGWGYQCGSFSRPRIDSAGDTRWIVDHIVAHEDPPRATPRTRVRTSSPTTREIPAARCYRVRWLGFPSDDDTWEPRSTLLRDVPDVVREDEDEIATFADLAVTVNANDHAPAEKSPAENERGGPRRD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21948.1 | 202 | 4.77 | -0.648 | 41.08 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR016197,IPR000953,IPR023780,IPR023779,IPR009003,IPR043504,IPR001254
Pfam: PF00385,PF00089
SMART: SM00298
KEGG:
PRINTS: