Effector profile
| PlantPEAD ID: PlantPEAD27941 | Uniprot ID: A0A0B7FCS3 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1108050 | Pathogen type: Fungi |
| Species: Thanatephorus cucumeris | Strain: Rhizoctonia solani AG1-IB 7/3/14 | Other name: Rhizoctonia solani |
| Gene name: | NCBI Gene ID: LN679117 | |
| Entry name: A0A0B7FCS3_THACB | Protein name: Guanyl-specific ribonuclease F1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTACGCTCTTCTTCAAACCGTGGTTGTCGTCGCTCTTTCTGGGCTCGCGCTCGCTATTCCTGCCCCGACCAAGACTACTCCCCTTGACAAGCGTGCTATCAGTGGTGTAACTGCCGCCAATTGTGACGGTTTCACTTTCACTGCTGCCCAAGTCTCTGCCGCAGCCTCTGCCGCCGCGAGCCGTGTTGCAAGCGGTTCCACCGTCGGAAGCAACAGTTACCCTCACGTCTTCAATAACAGGGAAGGCTTCACTTTTAACTCTGGCTGCCGTGCACCCTACTATGAGTTCCCGCTTTTCCGCTCGCAGGTCTACACTGGTGGAGACCCGAGCTACAACCGGGTTGTCATTGGTAGCGTTTCTGGATCGAATGCTGCGTTCTGTGACGTTATTACCCACTACGGCGCTAGCGGGAATAACTTCCTCCAGTGCGACTAA
Protein sequence:
MYALLQTVVVVALSGLALAIPAPTKTTPLDKRAISGVTAANCDGFTFTAAQVSAAASAAASRVASGSTVGSNSYPHVFNNREGFTFNSGCRAPYYEFPLFRSQVYTGGDPSYNRVVIGSVSGSNAAFCDVITHYGASGNNFLQCD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 15034.8 | 145 | 7.67 | 0.172 | 34.82 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR016191
Pfam:
SMART:
KEGG:
PRINTS: