Effector profile
| PlantPEAD ID: PlantPEAD27961 | Uniprot ID: A0A5C3E1K1 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 86804 | Pathogen type: Fungi |
| Species: Ustilago trichophora | Strain: NBRC100155 | Other name: |
| Gene name: | NCBI Gene ID: OOIN01000005 | |
| Entry name: A0A5C3E1K1_9BASI | Protein name: Probable ribonuclease T1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGGTTCTCGCTTGCTCTCCTTGCCCTCGCCCCCGCTGTGGCCTTTGCTGCTCCCCTTGAGCCCCGTCAGGGCGGTGTCTCCGTCAACTGCGGTGGCACTTACTACACCTCAACCCAGGTCAACCGCGCCATCAACAACGCCAAGAGCGGCCAGTACTCGAGCTCCGGCTACCCCCACACCTACAACAACTACGAAGGTTTCGACTTTTCTGATTACTGCAACGGTCCCTACAAGGAGTACCCTCTCAAGACCTCGTCTTCCGGCTACACTGGCGGCTCGCCTGGTGCTGACCGTGTCGTCTACGACAGCAACGACGGCACCTTCTGCGGCGCTATCACACACACCGGCGCTTCAGGCAACAACTTTGTTCAGTGCAGCTACTAA
Protein sequence:
MRFSLALLALAPAVAFAAPLEPRQGGVSVNCGGTYYTSTQVNRAINNAKSGQYSSSGYPHTYNNYEGFDFSDYCNGPYKEYPLKTSSSGYTGGSPGADRVVYDSNDGTFCGAITHTGASGNNFVQCSY
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 13563.8 | 128 | 6.01 | -0.415 | 19.04 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR016191
Pfam:
SMART:
KEGG:
PRINTS: