Effector profile
PlantPEAD ID: PlantPEAD27984 Uniprot ID: A0A0W8CHK5 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 4790 Pathogen type: Oomycota
Species: Phytophthora nicotianae Strain: Race 0 Other name: Brown rot and root rot of citrus agent, buckeye rot agent, pineapple heart rot agent, pistachio foot rot agent, sesame blight agent
Gene name: NCBI Gene ID: LNFO01003160
Entry name: A0A0W8CHK5_PHYNI Protein name: Crinkler (CRN) family protein
DOI:
Gene/Protein information
Gene sequence:
TTAGTTCCGCCTCTGCCGTTTTCGCCGTTTCAAGTATTCTTGCTCAAGCTGATGGAGTCGATCGAGTGCTGCAACTGCAGTGGGTCTTCTCGACGGATCGTCATGCATCAGGAGCTCCAGGAACTGTGTTCTCTCTCTCCCCGTGTCATACCAACTTCCGTAGACTTCACCTCCACACGTTTGGATCAACCGCCCAACAGACCATACGTCCACCGCAGTTGTGTGAATACCATCGCTGAAGATCTCGGGGGCGTGTTCGGCTTCACTCAGGTGGTTGCCGCTTGGTGAAAGCTGTGGAGTTTGCGCGGCGTCCATGAAATCTATCAGGAACCACGAATTGTCGCCATCGCGACTCTTGATAACATTCAGCCATCGAATATCTCGATGCATCCACGAAGCAGCATGCAGCTTCACCAATGCTTGCAACACATTTGCGAGCGCGCGAAATAACTCCACAAGATTTGCTGGTCTTCTTTCTTGACCACGTGGCTTGAATATCAATCGCATTGTATTCTTGTCTGCATGATCCAGACGATCGACGTTCGGGATGGCGTGCTCTTCCAACACCTTGTACACCGCTTCAACATGGTCCTTTGCTCGTTGAAATAGCGCTTTCGGGAAACACTTGACAACGCGGGATGGCTCGAGAAGTATCCTGATCCCTTGATCTCGAGATATTGCCCTGTACTCATCTCGAGCGCTTTCTGGACACGCACTTGCAAGGCTCCGTAATAATCGTGCGACGTTCAAAATTGCCAGCAGCAAACGACATCGTCCTTCCAAATGTTTGAGATCATATACTCCCAACTCAATTGCGTCCACTTCATCGTGCACACGAGTGATAGCATACAATCTAACTTCATAACCAACGGCTGCGTATCCGAACAAATATGGAGCGTCACCGTAGCTCCAAACAAGCTTCTCAAATAACTCGCGCCTCGGCGTCTCCATCTGCTCTCCAGGGGCCTTCTCCTCACCGCGAAACACGCACACCGAATCCACAATGAAAAGGTAGTCGGGGCGACCTGTTGACTCCGATCGACTTGTATTTCGATCGCTCTTGCCGATGCTAACGAAGTTTAATACGTGGCGGATCAAGTCGTCCCAATACGAGACGAACGAATACTTTGTGTCACCAGGATCCACGGATTCGACCACACGACTGCCGATCTGATACAAAAACTCCACACAGGGCTCCGCGTTGTCGATCCGAAAGAGCTTGTCCAT
Protein sequence:
MDKLFRIDNAEPCVEFLYQIGSRVVESVDPGDTKYSFVSYWDDLIRHVLNFVSIGKSDRNTSRSESTGRPDYLFIVDSVCVFRGEEKAPGEQMETPRRELFEKLVWSYGDAPYLFGYAAVGYEVRLYAITRVHDEVDAIELGVYDLKHLEGRCRLLLAILNVARLLRSLASACPESARDEYRAISRDQGIRILLEPSRVVKCFPKALFQRAKDHVEAVYKVLEEHAIPNVDRLDHADKNTMRLIFKPRGQERRPANLVELFRALANVLQALVKLHAASWMHRDIRWLNVIKSRDGDNSWFLIDFMDAAQTPQLSPSGNHLSEAEHAPEIFSDGIHTTAVDVWSVGRLIQTCGGEVYGSWYDTGRERTQFLELLMHDDPSRRPTAVAALDRLHQLEQEYLKRRKRQRRN
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
47018.5 408 6.52 -0.405 39.07
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.