Effector profile
| PlantPEAD ID: PlantPEAD28307 | Uniprot ID: A0A8T1W7J3 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 109152 | Pathogen type: Oomycota |
| Species: Phytophthora boehmeriae | Strain: SCRP23 | Other name: |
| Gene name: | NCBI Gene ID: JAGDFL010000433 | |
| Entry name: A0A8T1W7J3_9STRA | Protein name: C2H2-type domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCATGACGAAATGCCACAGAAGTTTTGGTGTTGACGTAAAGCACGCTCCTCATCGAACTCTCGACTGCAGGTCGAGCATTTGCGCTTAGACGACGACCGTGGCTGGAGCTTCTGCCAATGTGCATCGAACTCTCCATCAGAAGCGAAGGAATGCTGACAGATGTCGCACATTTTGGCTAGAGTTGTTGTGGTAGTCGGAGGGACAGGTTGCTCTTGCGATGTTTTAGCTTCAGACGAAGCCATTTCTGCTGGCTGTGCTGAGGTCTTTTCGTTCGCTAACTGCTGCTGCTCGTACCAGTCCGGCTTAATCAGCGGGTCTTTGCCGTGTTTGGCGAGTTGGTGTTGTCTTCTGGCATCCTCCTTCTTGAATGTGCGGTCGCAAAAGCTGCACGGCAGCAGTGCACGTGTCGGCGCAGTCCCCTCCAGCTCATGCACCATATGCACGTGCGTTCTCAATCCTTGTGCAGACTTGAAGCTCCTTTCGCATTGGTCGCACGCGAACTCCAGTGGCAACTCCTTCTCCGCCTTCCGTTTTCGCGAGACAACCGCCTTCTTCTCTTCCGTCAGTACAGGTGCAGCATCGACGTCAGCCTTTTCATCCTCACGCCTCCTTCGGAAAATAAACAGCGTGCTGGTCTGCTGCTTCTTCTCTCCATGGAGCGTCACCAGGTGGAAGCTCTTGCCGTTCTGGTGCCGTTTACGCTCGTACCCGACACCAAAACGCTCGTCGTTGTCCACATCTTGCACCTGTTTGAACAGCTTCAGTCCAGCCTTCTCTGCTCGTTGCAACGCCTGCCAGCGTTCTGGTTGTCCCTCCGCCAGCGTTAAATAGATCCCTCTGTCCTCATCTTGGCTCGTGGGGTCCAAAACTTCTAGTGCAGACGCGTAAAAGTGCGACAGCAAACTCTGGTGTCTCTTAACGTTCTCCTCTCCACAGTGAGGGTGGTTGAACACCACCGCGTCAAACTCGAGACGCAACTTTTGTTCCTGGCCAGTCATCGACTCTCTGAGGTTCGTAGCGTCCACCCGATGCAGTAAAGTCGCCCCAACCTCCTTCAGCTGCGCGCAGATGCGCTCACTCTCTGGGTATTTCCCCACCAGCTCCTGGTAACTATCGAACGACGTGGCAGCCAGCTGCAGAGGTTTGCCACGAGCCTTGAACCGCTTGGCCAGAGCCAACGAGTAGCTGAAATTGCCATCACCGACGGTCAAGACGCGGTGCTGAGGGTCTGACGATGATGGCGAGGCTTCGTGCGGGTCTGTGGCCGCGCTGCTTGGGTTGGAAACGTCGTTTAACGCTGTCATCGGAGCGCCATCTTGCTGTGCCAT
Protein sequence:
MAQQDGAPMTALNDVSNPSSAATDPHEASPSSSDPQHRVLTVGDGNFSYSLALAKRFKARGKPLQLAATSFDSYQELVGKYPESERICAQLKEVGATLLHRVDATNLRESMTGQEQKLRLEFDAVVFNHPHCGEENVKRHQSLLSHFYASALEVLDPTSQDEDRGIYLTLAEGQPERWQALQRAEKAGLKLFKQVQDVDNDERFGVGYERKRHQNGKSFHLVTLHGEKKQQTSTLFIFRRRREDEKADVDAAPVLTEEKKAVVSRKRKAEKELPLEFACDQCERSFKSAQGLRTHVHMVHELEGTAPTRALLPCSFCDRTFKKEDARRQHQLAKHGKDPLIKPDWYEQQQLANEKTSAQPAEMASSEAKTSQEQPVPPTTTTTLAKMCDICQHSFASDGEFDAHWQKLQPRSSSKRKCSTCSREFDEERALRQHQNFCGISS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 49934.9 | 442 | 7.01 | -0.838 | 49.47 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR019446,IPR013087
Pfam: PF10354,PF13894
SMART: SM00355
KEGG:
PRINTS: