Effector profile
| PlantPEAD ID: PlantPEAD28449 | Uniprot ID: A0A8T0YAY2 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 29920 | Pathogen type: Oomycota |
| Species: Phytophthora cactorum | Strain: | Other name: |
| Gene name: | NCBI Gene ID: RCMG01000918 | |
| Entry name: A0A8T0YAY2_9STRA | Protein name: Choline dehydrogenase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATCCGCCACGCTCTTCATCGCTCGACACTTCCAAGCGCCTCCACTCTACGAACCCTTCAGGAGTTCGACTACGTCATCGTTGGCGGGGGGTCGGCCGGGTGCGTCCTCGCCAATCGACTGAGCGCCGACACGTCCAACTCCGTGTTGCTAGTGGAGACTGGACCCAAAGACCGCGGGCTCTTCGACTCGATTCGACTGGCAATGCCGGCCATGTTGACTGCCAACCTCATCGACGACCGGTACAACTGGAACTACATGACAGAACCCCAACAACATCTGAACGGACGTCGACTAACGTGGCCCAGAGGACGAGTCCTAGGCGGTTCGTCCTCAATCAACGCGATGATCTACAACCGGGGCCATGCATTGGACTATGACGACTGGCAACAGGCTGGAGCCGACGGATGGAGCTATGCAGACTGTTTGCCATACTTTAAGAAGGCCCAGACCCATTCACTCAGTGCTGATGAGTATCGTGGAGGCGACGGACCGTTAAAGGTAACCAGAAGACTGCAACGAGACCAACCATTGTACCAAACGTTCCTCGACGCTGCGATGCAGGCAGGGTATCCATTTACAGACGACGTGAATGGGTATCAACAGGAAGGCGTAGGCTGGTTGGATCATACCATCCACAACGGACAGAGATGTAGTGCTTCTGCTGCGTATTTGACGAGCTCTGTATTGACACGAGAGAACTTGACAGTTGTTACCGGTACATTCGTGAACAAAGTGGTGTTTGAAGGCAAGAAAGCTGTCGGGATCGAGGTAGAACCGTTCAAAGCTGATGGACATCGGCCGAAACAAATTCGAGCCAAAGAGGTGATTCTATCAAGCGGAGCGATCAACTCGCCACAGTTATTGATGGTATCCGGTGTGGGAGACGCCGACCAGTTAAAAAAGACCGGAATACCCGTAGTACACCACCTCCCAGCGGTAGGACAAAACATGGAGGAGCATTTGGGTGTTTACTTGCATGTCGCGTGTAAGAAACCTGTGACACTGTACCATGCGACCCCGCACTTCCCACACAAAATGGCGTGGATGGGGGTCCAGTGGCTTGTCTCCAAGACTGGTATGGGGACCTCGTCACACATTGAAGTGGGTGGCTTTCTCCGCAGTGCTCCAACTAAATGCCACCCGGATCTCAAGTGGCAGTTTCTGCCTGGTGCAAGTGACGAAAACCGTCAACTCTTACGTGACGGCCACGCTATGATGCTCCATTGTACACCACTACGCGCGACGAGCCGAGGGTACATCAAGCTGCGAAGTGCAAACCCGCGAGACCGTCCCGTTATCCAACCCAATTACCTGGCAACTGAGACCGATCGCGTGGACATGCGCAATGGCGTGCGGTTGACACGTGAAGTTCTCAAGCAACGAGCGTTCGATGAATATCGCGGTGAAGCGATTTCTCCAACTGATGAAGTGCAGTCCGACGCTGAGATTGACGCGTGGATTCGACAGTACGCGAGCACGGATTACCACCCGTCCAGCACGAATCGAATGGGTAAAGAGACCGATCTTGACTCGGTAGTCGACGCTCAGACACGAGTTCACGGCCTTGAAGGACTGCGTGTTGTGGACGCGTCGATCATGCCCAATAACGTTAGTGGGAACCTTAATGCACCCACCATTATGCTCGCTGAAAAAGCTGCTGACATCATCCTCGGCAACCCAGCGCTACCCAGGTCCGACGCTCCTGTTGTGGAGATGGCGACGTCTAGTAGCATCCCGACATCCCAGCTTTTGCATGGTTTAGCCCCGATCGGGCAGCGGCAGTACCAACCGCTTCTATCGAAGTTGCAGCGACCCGATCTCGTGAGTGCGCAAGGTTTTATTAATGGAAAGTGGGTCGAGGCACACGGAGGCGACCAGTTCACTGTTAACGACCCTGCAACGGAGCAGGAAATCGCCTGCGTGGCGAGTATGGGAGGTGAAGACACTCGCGATGCCATCGCTGCTGCGTCTGCGGCTCAGCATCAATGGGGGAACACTACGCCACCGGTCCGAGCAAAGCTGTTGAAACAGTGGGCCGCTGCAATTACCGCCAATGCCGAAGACTTGGCAATTATCGGATCCATGGAATGCGGCAAGCCCCTACCAGAAGCCAAGTGGGAAATCGAGTTTGCAGTCGGTGTAATCGAGTACTTTTCCCACGAAATCGTACGCTCCAGTGGGTTTCTGATATCCCCAACTCAGCCGACCCAGAAGATTCTTGTCATGAAGGAACCTGCGGGTGTATGCGGTATCATCTCACCGTGGAACTTTCCGTATGCGATTCTGGGTCTGAGTCTGGGTCCTGCTCTTGCTGCTGGATGCACCACCGTCATCAAACCCGCAGGAGAGACTCCTCTCTCTATGCTCGCATTGGCCAAACTCGCTGAGGAAGTCGATTTTCCTCCAGGAATTATCAATGTGATCACCACTTCTAGAGACAAATCCGAAGAGATTGGTGGGGTGTTGACATCAAGTCCCGATGTTAAGAAAATGACGTTTGCAGGTTCGACGCAAGTTGGAAAATGGTTGATGCGTCATTCTTCTGAAACAGTGAAGAATTTGTCGTTCGAACTTGGTGGCAACGCGCCGTTCATCGTGTTCGAAGATGCCGATCTGGAAAAAGCGCTGGATGGTTTGATCCAATCCAAGTTCCCCAACACTGGTCAGGCCTGTATCGCTAGCAACCGCATCTTCGTTCACTCGTCTATCTACGACACCTTTGCTGCCAATATCGTGGAACGAGTGAAAACTCTCAAGATGGGCGTACCTTTGCAACCTGGCGTTCGACTTGGACCCTTGATCGGACCTACTGCAGTTAAGAAAATGGCTGATTTGGTCGAAGACGCTGTGAGTCACGGCGCTAAGGTTCTTGTTGGAGGAAACTGCAGCGACCTTGGCAAGAATTTCTACGAAGCGACAGTCCTGATCAAGGTCGATGAGTCCATGCGTATCTGGAATGAAGAAATTTTCGGTCCAGTGCTCCAGTTATCCAGTTTTTCGAGCGAGGAAGAAGTGGTTCAGAAGGCGAACGATTCGACGGCTGGACTGGCGGGGTACTTCTACACACAAGACGTGGCTCGGATCTTTCGAGTTGCCAGTGAGCTGGAGTGCGGTATGGTCGGAGTAAATAGCGAGTTGGTAACCCACGTTGGAGCTCCGTTCGGAGGAATTAAGGAATCCGGTATTGGACGTGAAGGTTCGTCTGAGGGTCTGGATGAATACTTGGAGACAAAAATGGTTTGCATCGGTGGACTGTAG
Protein sequence:
MIRHALHRSTLPSASTLRTLQEFDYVIVGGGSAGCVLANRLSADTSNSVLLVETGPKDRGLFDSIRLAMPAMLTANLIDDRYNWNYMTEPQQHLNGRRLTWPRGRVLGGSSSINAMIYNRGHALDYDDWQQAGADGWSYADCLPYFKKAQTHSLSADEYRGGDGPLKVTRRLQRDQPLYQTFLDAAMQAGYPFTDDVNGYQQEGVGWLDHTIHNGQRCSASAAYLTSSVLTRENLTVVTGTFVNKVVFEGKKAVGIEVEPFKADGHRPKQIRAKEVILSSGAINSPQLLMVSGVGDADQLKKTGIPVVHHLPAVGQNMEEHLGVYLHVACKKPVTLYHATPHFPHKMAWMGVQWLVSKTGMGTSSHIEVGGFLRSAPTKCHPDLKWQFLPGASDENRQLLRDGHAMMLHCTPLRATSRGYIKLRSANPRDRPVIQPNYLATETDRVDMRNGVRLTREVLKQRAFDEYRGEAISPTDEVQSDAEIDAWIRQYASTDYHPSSTNRMGKETDLDSVVDAQTRVHGLEGLRVVDASIMPNNVSGNLNAPTIMLAEKAADIILGNPALPRSDAPVVEMATSSSIPTSQLLHGLAPIGQRQYQPLLSKLQRPDLVSAQGFINGKWVEAHGGDQFTVNDPATEQEIACVASMGGEDTRDAIAAASAAQHQWGNTTPPVRAKLLKQWAAAITANAEDLAIIGSMECGKPLPEAKWEIEFAVGVIEYFSHEIVRSSGFLISPTQPTQKILVMKEPAGVCGIISPWNFPYAILGLSLGPALAAGCTTVIKPAGETPLSMLALAKLAEEVDFPPGIINVITTSRDKSEEIGGVLTSSPDVKKMTFAGSTQVGKWLMRHSSETVKNLSFELGGNAPFIVFEDADLEKALDGLIQSKFPNTGQACIASNRIFVHSSIYDTFAANIVERVKTLKMGVPLQPGVRLGPLIGPTAVKKMADLVEDAVSHGAKVLVGGNCSDLGKNFYEATVLIKVDESMRIWNEEIFGPVLQLSSFSSEEEVVQKANDSTAGLAGYFYTQDVARIFRVASELECGMVGVNSELVTHVGAPFGGIKESGIGREGSSEGLDEYLETKMVCIGGL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 117955 | 1086 | 5.93 | -0.186 | 41.47 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR016161,IPR016163,IPR016160,IPR029510,IPR016162,IPR015590,IPR036188,IPR012132,IPR000172,IPR007867
Pfam: PF00171,PF05199,PF00732
SMART:
KEGG:
PRINTS: