Effector profile
PlantPEAD ID: PlantPEAD28582 Uniprot ID: A0A6A3GJM7 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 129364 Pathogen type: Oomycota
Species: Phytophthora rubi Strain: SCRP249 Other name:
Gene name: NCBI Gene ID: QXFV01007285
Entry name: A0A6A3GJM7_9STRA Protein name: Reverse transcriptase Ty1/copia-type domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
TCCTTGACACAGTCACTCAGCGCCATGTATTCGGCTTCGGTTGAGCTCAGAGCGACAGTCTTCTGGAACGTCGAGCGCCACACCACAGGAGCACCACACAGCATCAGCAGTATCCCGCTCACCGAGCGTCGGTCGTCCCGATTGCCGGCCCAGTCCGCATCGGAGTAGGCTTCAAGCTGCGTTCCCAGTAGGCCATCGTACACGATGCCCACATCCTTGGTCTTCAACAGGTAGTGCACCACCTTGATACCAGCATCCCAGTGCTTTTCACCGGGTTTCTCCAGGAAACGGCTGAGCTTGGCGACTGCAACCGAAATGTCAGGTCGCGTTCCACATGCCAAGTACATCAGGCTTCCCACAAGCGACCGATAAGGCTTCGACTTCATCTTGGCCTTGTCTTCTTCAGTCTGGGGTTCGTCAGCCTTGGTCAACTGCACACCCGGTTCCAGTGGTGTCAGGTATGGCTTCGCGTTCTCTTGACCAAACTTCTTGATAATCGACTCGGTGTACGCTCTCTGGCTGATACCCAACGTTCTGCGCTCCATGTCGTAGTCGATCTCGATGCCGAGAATGAAACGAGCTCTTCCCATGTCCTTGATCCGGAACTTCTCCGCGATTCCAGCCTTCACGGACGCGATCAGCATGTCGTCCACGTAGAGACACACTATGCATTCATCTTTACCCTCGCCTCTCGTGTAGACGCATGGGTCGGCGTCAGCAGGCTCGAATCCCATACTCTTGAGGTGCTTGTCGATCGTCTCGTTCCAAACACGCGATGCATGCTTGAGTCCATACAAACTCTGGAGCAGCATGCAGACGACGTCGTCCTCGCCTTCAGCTTCGGCCAATTCCAGGAGCTCCCTGAGTCCTTCCGGCAACTCCATGTAGTTCTCTTCTTCCAGCTTCCCATACAGGAACGCTGTGTTGACGTCGCACTGCTCAATCTCCATTCCTTCTGCGCTGCATTTCGCCAGCATGGCACGGATCGAGTTGAGGTAAGCCACCGGCGAATACGTTTCTTCATAGTCGATGCCGTGACGCTGCGAGTACCCTTTAGCCACCAGACGAGCCTTGTACCGAACGACTTGTCCCTTTTCGTCTCGCTTTAACGCGAACACCCAGCGGCAACCGGTCGGGCGCTGGTGTGCTGGCTTGGGTACCAGCTTCCAGGTCTTGTTGACAATGAGTGACTTAAGTTCACTTGCAATTGCCTTCTTCCATTCATCTTGGTCTTGACGTGTAGTTGCCTCAGCATACGTCTTCGGGACCTCCTCCGTAGCAGCCATGAGCTGACCTCCTTCAATAGCGAGCAGCTCGTCACTTGGCTTGACGCGAGCCTGGCTCACCTTCTGTCGCTTGGTTCCAATCGCGGATGGAGCGACAATCTGCTTCTTGCGTCCTTCCGCTTCCCCAGGATCCGTGGTCTCCTCAATGTGCCGAGTACGCGAGCGAGTAATCAT
Protein sequence:
MITRSRTRHIEETTDPGEAEGRKKQIVAPSAIGTKRQKVSQARVKPSDELLAIEGGQLMAATEEVPKTYAEATTRQDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPTGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVNTAFLYGKLEEENYMELPEGLRELLELAEAEGEDDVVCMLLQSLYGLKHASRVWNETIDKHLKSMGFEPADADPCVYTRGEGKDECIVCLYVDDMLIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQRAYTESIIKKFGQENAKPYLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLEKPGEKHWDAGIKVVHYLLKTKDVGIVYDGLLGTQLEAYSDADWAGNRDDRRSVSGILLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVK
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
54558.6 486 6.28 -0.431 44.33
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.