Effector profile
PlantPEAD ID: PlantPEAD28642 Uniprot ID: A0A6A3H985 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 129364 Pathogen type: Oomycota
Species: Phytophthora rubi Strain: SCRP249 Other name:
Gene name: NCBI Gene ID: QXFV01005102
Entry name: A0A6A3H985_9STRA Protein name: Integrase catalytic domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
CAACCCGGAACAGACCGTCAAGAGTGCTGGAGTCCTCGACCTCATCCACTCGGACGTCATGGGCCCAATGCCGACGAAGACACCGGGTGGCTGTACGTACGCTGTCACGTTCATCGATGATTTCTCATGTCACGTCACGGTGTACTTCATGAAGAAGAAGAAAGCGGAAGTGTTGGAGAAGTTCAAGATGTTCAAGGCCGGTATGGAAAACGCTACAGGGCGCAAGATCAAGCGCATCCGCTCGGACAACGGCGGCGAATACACGGGTAGACTCTTCAAAGAGTACCTGGCCAAGCAAGGCAATCGTCATGAGAAGACGGTGCCGTACACGCCTCAGCAGAATGGACTGGATGAGCACATGCACCGGAGCCTCGTGGAGATGGCTCGTTGCATGCTCGACCACAAGGGCATCGACAAGAAGTGGTGGGCTGAAGCAGTCAACACGTCGGCGTGGATCATCAACAGGATTCCCAACACCGTAACTGTGAAGACGCCCTACGAGATCGTGTACCAGAAGAAACCTCAACTCAAGAACCTGAAGGTGTTCGGTGCACTCGGCTACGGACACATTCCGGACGAGAAGCGCCGCAAGCTTGACGCCAGGGCGTTCAAGTGCCGCTTCTTGGGCTACGAGGATGGTGTCAAGGGATACCGCGTCCTCAATGTCGCTACTGGCCAAGTGAAGATTGTGAGCACGGTGAAGTTCATGGAGACCACTAACACGGACGACTTCATGACTGAAGTCGAAGGCGACGACAAAGATGAAGATGTTGCTGCGCCTCACGCTACTGCTCCGAGTCGTGGACAGACGCAGACGCTCACGATCTTCAATGATGAGGTGGTACCACTTCAACATGAGGTGACCACAGAGACTGCAATCGCCCCTGCACCTTCTCACCCCATTAATACTCGCTCGCGTACACGGCACATTGAGAAGGCCATGGATCCTGAGGAAGCGGAAGGACGCAAGAAGCAGATTGTCGCTCCATCCGCTATCGGAACCAAGCGCCAGAAGATAAACCAGGTTCGCGTCAAGCCAAGTGACGAGCTGCTCGCTATTGAAGGAGGTCAGCTCATGGCAGCAACGGAGGAGGTCCCGAAGACGTATGCTGAGGCAACTACACGTCAAGACCAAGATGAATGGAAGAAGACGATTGCAAGTGATCTGGAGTCACTCATTGCCAACAAAACCTGGAAGCTGGTACCCAAGCCAGCACACCAGCGCCCGATCGGTTGCCGCTGGGAGTTCGCGTTGAAGCGTGATGAAAAGGGACAAGTCGTTCGGTACAAGGCTCGTCTGGTGGCTAAGGGGTACTCGCAGCGTCACGGCATCGACTACGAGGATACGTACTCGCCTGTTGCTTACCTCAACTAG
Protein sequence:
NPEQTVKSAGVLDLIHSDVMGPMPTKTPGGCTYAVTFIDDFSCHVTVYFMKKKKAEVLEKFKMFKAGMENATGRKIKRIRSDNGGEYTGRLFKEYLAKQGNRHEKTVPYTPQQNGLDEHMHRSLVEMARCMLDHKGIDKKWWAEAVNTSAWIINRIPNTVTVKTPYEIVYQKKPQLKNLKVFGALGYGHIPDEKRRKLDARAFKCRFLGYEDGVKGYRVLNVATGQVKIVSTVKFMETTNTDDFMTEVEGDDKDEDVAAPHATAPSRGQTQTLTIFNDEVVPLQHEVTTETAIAPAPSHPINTRSRTRHIEKAMDPEEAEGRKKQIVAPSAIGTKRQKINQVRVKPSDELLAIEGGQLMAATEEVPKTYAEATTRQDQDEWKKTIASDLESLIANKTWKLVPKPAHQRPIGCRWEFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEDTYSPVAYLN
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
51711 457 9.18 -0.67 36.77
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.