Effector profile
PlantPEAD ID: PlantPEAD28667 Uniprot ID: A0A6A3HV58 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 129364 Pathogen type: Oomycota
Species: Phytophthora rubi Strain: SCRP249 Other name:
Gene name: NCBI Gene ID: QXFU01004122
Entry name: A0A6A3HV58_9STRA Protein name: Reverse transcriptase Ty1/copia-type domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
TCAATTCGATGTCTCGATCTTGGGGCTAACGTTGCTCCGTATCATCAAGTAGCGCAACGTCTTCGACGATAGACCCTTAGTCATGACGTCAGCGAGCTGGTTCTTGGTATCCACGTACTCCAGCTCCACTTCGTTGCTCACCACCTTCTCTCGAATGAAGTGGTAGCGAATGTCGATGTGCTTGGTGCGAGCTTGGTAACCGACGTTCTTCGCCAAAGCCATCGCTCCTTGGTTGTCCTCGTAGATCACCGTAGCCCCCACTTGCTCAGCACCAATGTCCTTAAGCAGACGTCGCATCCAGACGCATTCCTTGACACAGTCACTCAGCGCCATGTATTCGGCTTCGGTTGAACTCAGAGCGACAGTCTTCTGGAACGTTGAGAGCCACACCACAGGAGCACCACAGTGTCCATACACAATCTGGAGCAGCAT
Protein sequence:
MLLQIVYGHCGAPVVWLSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSNEVELEYVDTKNQLADVMTKGLSSKTLRYLMIRSNVSPKIETSN
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
16164.7 143 7.7 -0.116 34.58
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.