Effector profile
PlantPEAD ID: PlantPEAD28674 Uniprot ID: A0A6A3I197 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 129364 Pathogen type: Oomycota
Species: Phytophthora rubi Strain: SCRP249 Other name:
Gene name: NCBI Gene ID: QXFV01003788
Entry name: A0A6A3I197_9STRA Protein name: Reverse transcriptase Ty1/copia-type domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
ATGGCTCATTGCATGCTCTACCACGAGGGCATCGACAAGAAGTGGTGGGCTGAAGCAGTCAACACGTCAGCGTGGATCATCCACAGGATTCCCAACGCCGTGACTGTGCAGACGCCCTACGAGATCGTGTACCAGAAGAAACCTCAGCTCAAGAACATGATGGTGTTCGGTGCACTCGGCTGTGGACACATCCCGAAACGAGAAGCGCCGCAAGCTCGACGCCAAGGCGTTCAAATTGTGCGCACGGTAAAGTTCATGGAGACCACTAGCACGGGCGACTTCATGACTGATGTCGAAGACGACGACAAAGATGAAGATGTTGCCGCGCCTCACGCTACTGCTCCGAGTCGTGAACAGACGCAGACGCTCACGATCTTCAATGATGAGGTGGTACCACGTCAACAGGAGGTGACCACAGAGACTACAATCGTCCCTGCACCTTCTCACTCCATGATTACTCGCTCGCGTACTCGGTACATTGAGGAGACCACGGGTCCCGAGGATACGGAAGGACGGAAGAAGCAGATTGTCGCTCCATCCGCTATTGGAACAAAGCGACAGAAGGTGAGTCAGGCTCGCGTCAAGCCAAGTGACGAGCTGCTTGCTATTGAAGGAGGCCAGCTGATGGCTGCAACGGAGGAGGTAACGAAGACGTACGCTGAGGCAACTACACGTCAAGACCAAGATGAATGTCAGAAGGCGATTGCAAGTGAACTGGAGTCACTCGTCGCCAACAAGACCTGGAAGCTGGTACCCAAGCCAGCACACCAAGGTCCGATCGGTTGCCGCTGGGTATTCGCGTTGAAGTATGACGAAAAGGGGCAAGTCGTTCAGTACAACGCTCGTCTGGTGGCTAAGGGGTACTCGCAGCGTCACCACATCGACTACGAAGAAACGTATTCGCCGGTTGCTTACCTGAACTCGGTTCGCGCCATGCTGGCGAGATGCGGCGCGGAAGGAATGGAGATTGAGCAGTGCGACGTCGTCACAGCGTTCCTGTATGGGAAACTGGAAGAGGAGATCTACATGGAGTTACCGGAAGGACTCAGGGAGCTCCTGGAATTGGCCGAAGCTGAAGGCGAGGACGACGGCGTCTGCATGCTGCTCCAGAGTGTGTATGGACTCAAGCAGGCATCGCGTGTTTGGAACGAGACGATCGACAAGCAACTCAAGCGTATGGGGTTTGGGCCTGCCGACGCCGACCCATGTGTCTACACGAGAGGCGAGGGTGTAGATGAATTCATAGCGTGTCTCTACGTGGACGACATGCTGATCGCGTCACGACAGAAGGTAGTGATCGCGTCCGTGAAGGCTGAAATCGCGGAGAAGTTCCGGGTCAAGGACTTGTGA
Protein sequence:
MAHCMLYHEGIDKKWWAEAVNTSAWIIHRIPNAVTVQTPYEIVYQKKPQLKNMMVFGALGCGHIPKREAPQARRQGVQIVRTVKFMETTSTGDFMTDVEDDDKDEDVAAPHATAPSREQTQTLTIFNDEVVPRQQEVTTETTIVPAPSHSMITRSRTRYIEETTGPEDTEGRKKQIVAPSAIGTKRQKVSQARVKPSDELLAIEGGQLMAATEEVTKTYAEATTRQDQDECQKAIASELESLVANKTWKLVPKPAHQGPIGCRWVFALKYDEKGQVVQYNARLVAKGYSQRHHIDYEETYSPVAYLNSVRAMLARCGAEGMEIEQCDVVTAFLYGKLEEEIYMELPEGLRELLELAEAEGEDDGVCMLLQSVYGLKQASRVWNETIDKQLKRMGFGPADADPCVYTRGEGVDEFIACLYVDDMLIASRQKVVIASVKAEIAEKFRVKDL
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
50430.4 449 5.26 -0.433 46.68
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.