Effector profile
PlantPEAD ID: PlantPEAD28710 Uniprot ID: A0A6A3IQL4 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 129364 Pathogen type: Oomycota
Species: Phytophthora rubi Strain: SCRP324 Other name:
Gene name: NCBI Gene ID: QXFU01002477
Entry name: A0A6A3IQL4_9STRA Protein name: Retrovirus-related Pol polyprotein from transposon TNT 1-94
DOI:
Gene/Protein information
Gene sequence:
GCATCGACAAGAAGTGGTGGGCTGAAGCAGTCAACACGTCGGCGTGGATCATCAACAGGATTCCTAACACCGTGACTGTGATGACGCCCTACGAGATCGTGTACCAGACGAAACCTCAGCTCAAGAACCTGAAGGTGTTCCGTGCACTCGGATATGGACACATCCCGGACGAGAAGCGCCGCAAGCTCGACACCAAGGCGTTCAAGTGCCGCTTCTTGGGCTACGAGGATGGTGTCAAGGGATACCGCGTCCTCAATGTGGAAACTGGCCAAGTGAAGATTGTGCGTACGGTGAAGTTCATGGAGACCACTAGTGCGGGCCACTTCATGACTGAGGTCGAAGGCGACGACAAAGATGAAGATGTTGCCGCGCCCCACGCTACTGCTCCGAGTCGTGGACAGTCGCAGACACTCACCATCTTCAATGATGAGGTGGTACCACTTCAACATGAGGTGACCACAGAGACTGCAATCGTCCCTGCACCTTCTCACTCCATGATTACTCGCTCGCGTACCCGGCACATTGAGGAGACCACGGATCCCGAGGAAGCGGAAGGACGCAAGAAGCAGATTGTCGCTCCATCCGCTATTGGAACCAAGCGCCAGAAGGTGAGCCAGGCTCGCGTCAAACCAAGTGACGAGCTGCTCGCTATTGAAGGAGGCCGGCTGATGGTTGCAACGGAGGAGGTCCCGAAGACGTACGCTGAGGCGACTACACGTCAAGACCAAGATGAATGGAAGAAGGCAATTGCAAGTGAACTGAAGTCACTCATTGTCAACAAGACCTGGAAGCTGGTACCCAAGCCAGCACACCAGCGCCCGATCGGTTGCCGCTGGGTATTCGCGTTGAAGCGTGATGAAAAGGGACAAGTCGTTCGGTACAAGGCTCGTCTGGTGGCTAAGGGGTACTCGCAGCGCCACGGCATCGACTATGAAGAAACGTATTCGCCGGTGGCTTACCTCAACTCGATCCGTGCCATGCTGGCGAAATGCAGCGCAGAAGGAATGGAGATCGAGCAGTGCGACGTCGACACAGCGTTCTTGTATGGGAAACTGGAAGAGGAGATCTACATGGAGTTGCCGGAAGGACTCAGGGAGCTACTGGAAATGGCCGAAGCCGAAGGAGAGGACGACGTCGTCTGCATGCTGCTCCAGAGTTTGTATGGACTCAAGCAGGCATCGCGTGTTTGGAATGAGACGATCGACAAGCACCTCAAGAGTATGGGATTTGAGCCTGCTGACGCCGACCCATGCGTCTACACGAGAGGCGAGGGTGAAGATGAATGCATAGTGTGTCTCTACGTGGACGACATGCTGATCGCGTCACGACAGAAGGCAGTGATCGCGTCCGTGAAGGCTGGAATCGCGGAGAAGTTCCGGATCAAGGATTTGGGAAGAGCTCGCTTCATTCTCGGCATCGAGATCGACTACGACATGGAGCGCAGAACGCTGGGTATCAGCCAGAAGGCATACACCGAGTCGATCATCAAGAAGTTTGGTCAAGAGAACGCAAAGCCGTGCCTGACACCACTGGAGCCGGGTGTGCAGTTGACCAAGGCTGACGAACCCCAGACTGAAGAAGACAAGGCCAAGATGAAGTCGAAGCCTTATCGGTCGCTCGTGGGAAGCCTGATGTACTTGGCGTGTGGAACGCGACCTGACATTTCGGTTGCAGTCGCCAAGCTCAGCCGTTTTCTGGAGAACCCCGGTGAGAAGCACTGCGATGCTGGTATCAAGGTGGTGCGCTACCTGTTGAAGACCAAGGATCGTACTTAACGTTTTCCCGTTATCTCTGGAATCGTATATCCTACTCAAATAGCTGGCTATTTCAGCGCTAAAGCCTCTATGTCTCCGTAGTTTTTGAGAAAGCATGCGGTTTTTAAAATTATTAAACTGTTTAACTTGAAGTTTGTATACTTTTGTTTCGTGTGTACCACAGAGATACCCAAAGCGAATTAATCCCGGGTGGGCTGTACGTACTTCTCCGGTCCGGAAAAGAATTATAACAGTTACGTTTTTTAGAGTAAAACCTCGCGCCGTACGCAGATTTCATTGGCCGATGTAAAACCTTGAGCACGACTGATTGGGTGAAAAGCATATATCTATCGATTTGTATTAAACTGGATTGACTGTTTTTGTAGCTTCTAGGCATTGTATTTGCTCTCGCAAATTGCGACTAAACGCAGCTCATTTTCCTCTTTCTGTGAGATATTTTAGCTTTTTAATATGAACATTTTTGACGTCACAGCGGGAAAAAACTTATCACCACCATAAAATGACGGTTTAAATGACTTCAGCGTGAATGCTATGGCTCGAAAACTGCAATGAAAAAAATACTGTGCGAAGCTACATATCGCGAGCTTTACAACAAGGTATGCAAGGCCTCAAACCGAAGTTTTAAAGCGGAGTTATTGTCGATTTGGTGATCTGTTAATTCTTTTCCGGACCGGAGAAGTACTCCGTAAACGAAGCACTACCGTAAAAGTCGGCTTCAGTGCGACACCAGATTTTTTCAATTGAGTCGTTTCGTTTTTATACAGCATTATTAGATTATAGGAGCGCTCGTAGAAGGGAGCACTTTGGCTCCTCTTTAGCCAATCACGCATCTGTATCATCATATCTGCCAGCATCATGGCTCTTTACATGTAATCTTTACAAAAACTGATCGTCCAATCATGCGTAGCTAAATGTTCATAATCTTTGGATACGTGCATGTTCTTGTCACCTGTACAATCTTCTAAGATATTTCTCGGCCAGTAGAAATTAAACAGATTAGACAGAAGTGGGCCAAGGAAGGTGTGTCAAGACAGCTGGGTCTGATGACTACTCGGTTATTAATTCACAGCGTGTCGCACTGAAGCCGATTTTTATGGTACCAGTATAAAAAAAAACCTCAGGTGCAGATACTGTAGTGAGAAACATTGTGTTTGACACACTACATTTACAGGAAACGAGCTACTGTACATCGTCGTCCCACCTACGGACGTGTCAATGCATGACAACGACTCCATTATGGCTGCCAATTCATGTCCACAGTCTCACTACGTTCATCTAGCCCCTCAGCGCGTTCATCAAAAAGGAGTACACTATCGTCGATTTACATGTACTGAGCATCACGCAGCCCACGCACAAACCTTGTTCCCTTCGGGGGCTAAAAGCCTTACTGCTTCGCTCTTTAGATGTTGCACCCAGCTCGTGCGCACGCCGTCTTTCGTCGGCTTGTTCCACGAGACGCCCACGGGCTGGCAGCAGTGCGCGTACGAGGGGTCGTGTTGCGGGCCGCAGCCTGCGGCGGTGGATGGCTGACGGTCTGGCTGGAGGTCTGAGGTTTTTCGTGGGGTGACAACTAACAAAAATATGCCAGCTGGTCAAATATGTCTCGGTGATTGGTTGAAACCTGAGGGTGACAATTAACAAAGGGTAACAATTAACACCGACATTACGGTACGCTTTAAGGTTGCTGTATTATGTCTTGTCGACTGATCCAAGCTAAGGTCGCGGTAACGCCATTCGAATTTAGTCAGACCGGTGATGCTCTTAAGCGTGACTTTGTTTAAACACGTCGATTACTTGTTGTCCTGAGTATTATCATGCCATCGACCTTCAGATTATCCCTGTCTATTTTACTATACCTGGGTTACACAGTCCACATTACAGTACAGTAATCTGCTTCCTCAGCGAACACCTGATATATATAAAATATGCGAAGGTATCTATTGCCAAAGGATAATGAAGCCCATGACTTCAGCCACTGTAGTATGTACCTCGAAGAGTGGGACTTCTTAAACACCATGCTTTCTTAGAAACTATAAGGTTTTACCTGTTTGCTGAGGAAGCAGATCACTGTATCCCAGAGTTCCGGATGGCTCAACAAAGAAGCGGACGGAGGCCGGCTTTAAACAAAGCTTCATTTCCATATGGTAGGATTACTGTACGAGACAGCAATCTCCAGCAGGGAAGATCCGTTGATATTATGAAAGTATTAAATCTAATTCTGGGATAGGAAAGCAACGTTGTGCTGATAGCCCAGCCCTCACAGGATTATTGCGTGAAGTGAGCACGCTGTCCGATCCGGTATACCGGTACTATCGGTTCGGTAGTGTCAAATGGTCTGTCAAAACGATGCGTTTGAACTGAATGATGGGATCGCAATTGAGAGAGGAAGGATGGCGGGCATCTACTGCGCCTGCTTCGCAGCCGCAGCATCTGCCCGCCATTCTTCCTAAAATAACTGCTATACATAGTATCTCGATTGTCGTAATTCAATGCTCCTATCCCAGCCTTCGCGGAGCCCAAGCTAAATAACGTATGTACAGTTGTATTGTAAAAACCGACAATTATGTCCTATTTTTTGCAAATCGATCGCTTTAAGCGCTTATTAAGCGGATGAATCCTTGTTTTGATATATATAAGCAGGATGCCACTCCGATTTGGCGTCCCCCATCCCTGTTCATATATCGCGGATCGGCGTCGATTTATAAGCAAATCGCTCTGAATGCCCAGTATCAGCTGGGCATTCTGAGGGCAGCTTGTATATAATATATAGATTATAAACGGCGTCCCAAATCAACGTGGGCTGCTAACTCGAAGCTGTAGCATATATAAACCCTAATGAGCACATATAATACTTATATCTCCGTATATTATGCGCGGAGCTACTTTTGCACGAGTAGTAGCTGCTTGTACTCGTAGTTCTGGCTGCTGCACCTCTGCGGCTATTTAATAAGCCCAGGGAGCAGAGCGTTCATTAGCATTTGGCCGAGATTTGCATATGGACGTTCTATCGCCAATCCTACGATTTAGTATTTTCTGTACCCCTTTTAATATGTTTTCTATCCCTCCTAATCAGCTTACTGGACTGGACATCTTTGTCGGCTTTCACAATACATGTATGAAAATACTATTTTACAAGACGGGTCGGGGAGAAGGCACAAAACCTTATATTTTACTGGGCACAGCTGTACATGATCCATTATCAATGCGGATCGACGCAGAACACCTGGTTTCCGTGCTCATACCCCTAAAAGGCATGAAACTAACTTACATGTAAAATGCCAGGGCAGTATGCGGCCACTCACAATACTGAAGTATGACTGTAAAGCTAGTCGCGGATGATTCATGCTGAAGTACATGTACAAGCCCGACGGTTGTGAATAATGCCGCTTCGAATTTACATAATTTCGACTCTCTGTCGGTGTCGAATCTCGCTGTTATGTAATAGAAAATCGTATTTCCATGTTCCTCACCATTTCTGGTGGGCATTGCCCAACTGGTGAGCTCATCATTGACAGTGCTGTACAGTTACAAGTACAGACTGCAGCTGGATACAGTGCCGGAGTCAGCTTCACCTCCATACAGATTTGGATACGCTTAAGTCTTGTAGCATTTTGTTCAACCACGGAAGTACTGTACCGGTAGGCAATGTGAAACGATCCCAGCACGTGCGGACAATGCGACCACTACATGTACCGCAAGCACAACTGCCCGACTAAGTAGTGCAGGTATACCAGAGTCTTCATTTGGACGAGTCTAGCGTTGCAAGCCGCTTAACCCTTTCACTACCAAACAAAACAGCACGAATTAGAGGTCCGCTGCGGACCTCTAACACGATAGTGCTTTACACCTACTGGCTAAAAGTCGCTCAAAAAAGATTGTGAGTCAAACAGGGACGAGACATAAATATTTTAGAGGTCCGCTGCGGTCCTCTAGCAGAGCATGGTCAAAATGTTGGCAAATGATTAGGATACATCATATGGGTTTCACTATGTATACCCTTATGGGACCACTGCGGTCCTACAATTCGCGTCTGGTAGTGAAAGGGTTAAATTGACGCTCAGCACATCGCGTTTTACAACAAGCAGCTGGTTTTGCAGAAAACATCGTGATTACTCCGCGAATTGCAAAACGCCCAGGGCACAGCCTATTTTCCCATCGCGCAGCTTTCTATAATGTACATCCTCGTTGCCGGGCCAAACACACCGAGAGATGCAAGAATGCTTTGCTTTCTCCGACTCGTGGCCTCCACGCGCACGAGGTACAGTTTTGAATGCCGCTAGACATTCACCCCCCCCCTCCCCCCACCAGAACCACTTCAGCGACAAACGAATAACTCCTTCTCGTCATTATCCATAGTTTGTCCTTCGTCCGACATGAGAGTCGTCTGCCCAGACCGCAGCACGATCGAGAATAGGCTAACCATCATCTTGGTTTGCATGCTGGCGCTGGCGCCATTACCATCATCAGCTTGGTCCTTTTCATCCCTCTTCAGTGGTGATGATGACGACTCGGGCTACGACAGCATCAGCGTCGACAAGTCCAACGGGTCCGATGTGAGACTGGAACAGCCTCTGCTGAAGGCCACGGACTGGTTCCTCACGGAGCAGGAGATCACGGCGTCTCGCGGCGGCATCCCTCGTAGCGACATGTCGACGTACACCAGAGGCAACTCGGTCGTAACATTCACTGTGACGAAGGAGTTCTTCGACTCGGCGTACAAAGACCTCTCGACGACGAAGGAGAACGACCGAGTCATGCTCGCCGCTTGGAACACGGATCTCATTCCGCTCACGCCGGACGTGGACCCCACCGGCGCCAAGTCGAACTTCGATGTGGTGGTTGGGGGGATCGTGAAGCGTGGTGGAGATGTCAAGATTCTCGGCTGGGTGAACAAGTTCCTCTTCTTCCAGGACATCGAGGTGCGTAACAAGATCAACAAGCTGCCCAAGTCCGGCATCAACGATGGTAACGCGCTCTTCATCTTCGACGACCGCCTTCCGTACGGGTTGTCTTCTCAGCATCAGAAGAACTTCGTGATTGCTGCGGGGAGCTCTTCCAGGCGAGACGAACACCCTGTTGCGATGTGGGCGGCATCGACCTGACCAATGACCGCTGGGATACCATCCACCACAATGTGTCGGCGATTCGGAAGGAGTCCGGCGTTCATTTCCGCAACAACGGCTGGGTCGACAGCAGTATGCGAATCCACGGACCGGCGGCGAAAGACGTGGCCAATAACTTCCTCGCTCGATGGAATTCTCCATATCTGCCGACTCAGGGCCTCGGGGACGATCTCATCGACTTCGAGAACCCGCAGTACTCATACCTGCCGCCACTCGACTACGCCAGCAGCAACATCACTTCAAAGCTCGGTAAACAAAGCGTGCAGATCGTCCGAACATTCAGCTGCAAGTACAAGCACTGGGAGTTCGCTCCGAATGGCGAAAACTCGCTCTTCCACGCGCGTATCAAAGCCATCAAGAACGCCAAGAACTACATCTACATCGAGGACCAGTACTTCATCCTCGTACTGGAGCTGCTGGATGCACTCATGGAGGTGATGCCGACACTGCAACGCCTGATTGTCCTTGTTCAGCCTCCGGAGCTACTCACCAAGTCCGGCGGCTACGAGAAGTACATGTATGAGAACATGCAGCCGCTCAAGGAGAAGTTTCCGAACAAGTTCAAGCTCTACACGATAAAGACGGACTTGGACATCTACATCCACAGTAAGCTCGTTGTCATCGATGACGTGTACTTGGCGGATGGCTCGGCCAACTGGAATCGCCGAAGCATGACGTCGGACCCGGAGCTGGACGCCAATGTGGTGGACGACGAGCACGTCAAGACACCAGACGGGGTCACAGTAGGGAAGGTTATCCGCGACTTCCGCGTGCGCAAGTTCCAGGAGATGACAGGGAGAAGCTACGAGGATATTGACACAATGAAGTTCCTGGACGCAGCGGATTTGTACGATACGGCCGCTGCAGAGGAGTCGTCGCTCATTCAGAAGTTTGATGTTGACAAGGAATGGTACCACAATCTCTTTGGGAGTGCTGTGCAGATGAAAGTTGATCGGCAAGACACGTGCGATGGCGCCACGTCCGATACCTCGTAAAAGAACGCAGGGTTGGTAGCGCAACGTAATTTAATAATAGAAAGTTGCCCAAGGCCCGTGTTCACGGATATCAAGCGTAATATCGGAAACTGCTATCACAAAAATCGGGGGATAGGACAACTGAAAAATCTATATCAATGGGACTCCCACGGTTCATATTTGGAAGGAAGCGGAGGGATACCAATTCTCATACACCCAAATCATTGAATGTCGTCATTTAACCCGTAGAGCTTTCAAGCATGAGGCACTCAAGTGAGTGGCGAAGACAACATGCGTGGCCAACACTTCCGTTTGCGTCTCACGGTGACGTTACTGTGTGAGCACGTACTCGCACCAATGGGCAGCACAGACTCGACGCACTCTAACTTAGTAGTGCGTTCTTGTCGGCGGTCGTAGACCCTTCCGCACCTGGAGCACGCCCGTCTTGTAAGTGCAGACGTCGCCTGGGAGTCGATGAGGGGTAGAAAGGAAATCCGAAAGTGAATTCATTTGAGTTAGATGTCCTTGTCCTGCTAGCGTCTTCCTACTCATGCAGTCTAAGGATGTAGGCATCGTGTACGATGGCCTACTGGGAACGCAGCTTGAAGTCTACTCCGATGCGGACTGGGCCGGCAATCGGACCGACCGACGCTCGGTGAGCGGGATGTTACTGATGCTGTGTGGTGCTCCTGTGGTGTGGCGCTCGACGTTCCAGAAGACCGTCGCTCTGAGTTCAACCGAGGCCGAATACATGGCGCTAAGTGACTGTGTCAAGGAGTGCATCTGGATGCGACGCCTGCTTAAGGACATTGGTGCTGAGCAAGTGGGGGCTACGGTGATCTACGAGGACAACCAAGGAGCGATGGCTTTGGCGAAGAACGTCGGTTACCAAGCTCGCACCAAGCACAT
Protein sequence:
MTPYEIVYQTKPQLKNLKVFRALGYGHIPDEKRRKLDTKAFKCRFLGYEDGVKGYRVLNVETGQVKIVRTVKFMETTSAGHFMTEVEGDDKDEDVAAPHATAPSRGQSQTLTIFNDEVVPLQHEVTTETAIVPAPSHSMITRSRTRHIEETTDPEEAEGRKKQIVAPSAIGTKRQKVSQARVKPSDELLAIEGGRLMVATEEVPKTYAEATTRQDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELPEGLRELLEMAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHCDAGIKVVRYLLKTKDRT
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
63528.9 564 6.83 -0.489 42.46
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.