Effector profile
PlantPEAD ID: PlantPEAD28720 Uniprot ID: A0A6A3JDE6 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 129364 Pathogen type: Oomycota
Species: Phytophthora rubi Strain: SCRP324 Other name:
Gene name: NCBI Gene ID: QXFU01001984
Entry name: A0A6A3JDE6_9STRA Protein name: Retrovirus-related Pol polyprotein from transposon TNT 1-94
DOI:
Gene/Protein information
Gene sequence:
ATGGGCAAGATGCGAGAAGACAACTTCTCTCGCAACCCGGAAAAGGCCGTCAAGAGTGCTGGAGTCCTCGACCTCATCCACTCGGACGTCATGGGCCCAATGCAGACGAAGACACCTGGTGGCTGTACGTACGCTGTGACATTCATCGACGATTTCTCGCGTCACGTCACGGTGTACTTCATGAAGAAGAAAACGGAAGTATTGGAGAAGTTCAAGATGTTCAAGACCGACATGGAAAATGCCACAGGCCTCAAGATCAAGCGCCACCGCTCGGACAACGGCGGGGAGTACACGGGTCGACTCTTCAAGGAGTACCTGTCCAAGCAAGGCATTCGTCATGAGAAGACAGTGCCGTACACGCCTCAGCAAAATGGACTTGCTGAGCGCATGAACCGGAGCATCGTGGAGATGGCTCGTTGCATGCTCTACCACGAGGGCATCGACAAAAAGTGGTGGGCAGAAGCAGTCAACACGTCGGCGTGGATGATCAACAGGATTCCCAACACCGTGACTGTGAAGACGCCCTATGAGATTGTGTACCAGAAGAAACCTCAGCTCAAGAACCTGAAGGTGTTCGGTGCACTCGGCTATGGACACATGCCGGACGAGAAGCGCCGCAAGCTCGACGCCAAAGCGTTCAAGTGCCGCTTCTTGGGCTACGAGGATGGTGTCAAGGGATACCGCGTCCTCAATGTGGCAACTGGCCAAGTGAAGATTGTCCGCACGGTGAAGTTTATGGAAACCACTAGCACGGGCGACTTCATGACTGAGGTCGAAGGCGACGACAAAGATGGAGATGAAGACGTTGCCGCGCCTCACGCTACTGCACCGAGTCATGGACAGACGCAGACGCTCACGATCTTCAATGATGAGGTGGTGCCACTTCAACATGAGGTGACCACAGAGACTGCAATCGTCCCTGCACCTTCTCACTCCATGATTACTCGCTCGCGTACCCGGCCCAATGAGGAGACCACGGATCCCGAGGAAGCGGAAGGGCGCAAGAAGCAGATTGTCGCTCCCTCCGCCATCGGAACCAAGCGTCAGAAGGTGAGCCAGGCTCGCGTCAAGCCAAGTGACGAGCTGCTCGCTATTGAAGGAGGCCAGCTGATGGCTGCAACGGAGGAGGTCCCGAAGACGTATGCTGAGGCAACGACACGTCAAGACCAAGATGAATGGAAGAAGGCAATTGCAAGTGAACTGAAGTCACTCATTGTCAACAAGACCTGGAAGCTGGTACCCAAGCCAGCACACCAGCGCCCGATCGGTTGCCGCTGGGTGTTCGCGTTGAAGCGAGACGAAAAGGGACAAGTCGTTCGGTACAAGGCTCGTCTAGTGGCCAAGGGGTACTCGCAACGTCACGGCACCGACTACGAAGAAACGTATTCGCCGGTGGCTTACCTCAACTCGATCCGTGCCATGCTGGCAAAATGCAGCGCAGAAGGAATGGAGATCGAGCAGTGCGACGTCGACACAGCGTTCCTGTATGGGAAGCTGGAAGAAGAGATCTACATGGAGTTACCGGAAGGACTCAGGGAGCTCCTGGAATTGGCCGAAGCTGAAGGCGAGGACGACGTCGACTGCATGCTGCTCCAGAGTTTGTATGGACTCAAGCAGGCATCGCGTGTTTGGAATGAGACGATTGACAAGCACCTCAACAGTATGGGATTCGAGCCTGCTGACGCCAACCCATGCGTCTACACGAGAGGCGAGGGCGATGATGAATGCATAGTGTGTCTCTACGTGGACGACATGCTGATCGCGTCACGACAGAAGGCAGTGATCGCGTCCGTGAAGGCTGGAATCGCGGAGAATTTCCGGATCAAGGACTTGGGAAGAGCTCGTTTCATTCTCGGCATCGAGATCGACTACGACATGGAGCGCAGAACGTTGGGTATCAGCCAGAAGGCGTACACCGAGTCGATTATCAAGAAGTTTGGCCAAGAGAACGCGAAGCCGTGCCTGACACCACTGGAACCCAGTGTGCAGTTGACCAAGGCTGACGAACCCCAGACTGAAGAAGACAAGGCCAAGATGAAGTCGAAGCCGTATCGGTCGCTTGTGGGAAGCCTGATGTACTTGGCATGTGGAACGCGACCTGACATTTCGGTTGCAGTTGCCAAGCTCAGCCGTTTCCTGGAAAACCCCGGTGAAAAGCACTGGGATGCTGGTATCAAGGTGGTGCGCTACCTGTTGAAGACCAAGGATGTGAGCATCGTGTACGAGGGCCTACTGGGAACGCAGCTTGAAGCGTATTCCGATGCGGACTGGGCCGGCAATCGTGACGACCGACGCTCGGTGAGCGGAATGCTGCTGATGCTATGTGGTGCGCCTGTGGTGTGGCGCTCGATGTTCCAGAAGACTGTCGCTCTGAGCTCAACCGAGGCCGAATACATGGCGCTGAGTGACTGTGTCAAGGAGTGCGTCTGGATTCGACGTCTGCTTAAGGAAATTGGTGCTGAGCAAGTGGGGGCTACGGTGATCTACGAGGACAACCAAGGAGCGATGGCTTTGGCGAAGAACGTCGGTTACCAAGCTCGCACCAAGCACATCGACATTCGCTACCACTTCATTCGAAAGAAGGTGGTGAGCAACGAAGTGGAGCTGGAGTACGTGGATACCAAGAACCAGCTCGCTGACTTCATGACCAAGGGACTATCGTCGAAGACGTTGCGCTACTTGATGATGCGGAGCAACGTTGGCCCCAAGCTCGAGACATCGAATTGA
Protein sequence:
MGKMREDNFSRNPEKAVKSAGVLDLIHSDVMGPMQTKTPGGCTYAVTFIDDFSRHVTVYFMKKKTEVLEKFKMFKTDMENATGLKIKRHRSDNGGEYTGRLFKEYLSKQGIRHEKTVPYTPQQNGLAERMNRSIVEMARCMLYHEGIDKKWWAEAVNTSAWMINRIPNTVTVKTPYEIVYQKKPQLKNLKVFGALGYGHMPDEKRRKLDAKAFKCRFLGYEDGVKGYRVLNVATGQVKIVRTVKFMETTSTGDFMTEVEGDDKDGDEDVAAPHATAPSHGQTQTLTIFNDEVVPLQHEVTTETAIVPAPSHSMITRSRTRPNEETTDPEEAEGRKKQIVAPSAIGTKRQKVSQARVKPSDELLAIEGGQLMAATEEVPKTYAEATTRQDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGTDYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELPEGLRELLELAEAEGEDDVDCMLLQSLYGLKQASRVWNETIDKHLNSMGFEPADANPCVYTRGEGDDECIVCLYVDDMLIASRQKAVIASVKAGIAENFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPSVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVSIVYEGLLGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSMFQKTVALSSTEAEYMALSDCVKECVWIRRLLKEIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIRKKVVSNEVELEYVDTKNQLADFMTKGLSSKTLRYLMMRSNVGPKLETSN
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
102471 908 7.96 -0.488 34.46
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.