Effector profile
PlantPEAD ID: PlantPEAD28761 Uniprot ID: A0A6A3LED2 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 129364 Pathogen type: Oomycota
Species: Phytophthora rubi Strain: Other name:
Gene name: NCBI Gene ID: QXFV01001229
Entry name: A0A6A3LED2_9STRA Protein name: Integrase catalytic domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
TTAGCTTCGACCAATTCCAGGAGTTCCCTGAGTCCTTCCGCTAACTCCTTCTTCCAGTGTTCCATACAGGAACGCTGTGTCGACGTCGCACTGCTCAATCTCCATTCCTTCCACACCGCATCTCGCCAGCATGGCGCGAACCGAGTTCATGAAAGCAACCGGCGAATGCGTTTCTTCGTAGTCGATGCCGTGACGCTGCGAGTATACCTTAGCCACCAGACGAGCCTTGTACCGAACGACTTGTCCCTTGTCGTCACGCTTTAGTGCGAGCACCCAGCGGCAACCGATCGGGCGCTGGTGGGTTGGCTTGGGTACCAGCTTCCAGCTCTTGTTGGCAATGAGTGACTCCAACTCACTTGCAATCGCCTTCTTCCATTGACGTGTTGACTGCTTCAGCCTACCACTTCTTGTCGATGCTCTCGTTGTAGCCGTCTGCACAAGGCTCCGGTTCATGTGCTCAGCAAGTCCATTCTGCTGAGGCGTGTACGGCACTGTCTTCTCATGACGAATGCCTTGCTTGGCCAGATACTCCTTGAAGAGTCGACCCTTGTACTTCCCGCCGTTGCCCGAGCGGATGCACTTGATCTTGCGTCCCGTGGCATTTTCGATGTCGGCCCTGAACATCTTGAACTTCTCCAAGACTTCCGTTTTCATCTTCATGAAATACACCATGATGTGACGTGAGAAATCGTCGATGAACGTGACAGCGTACGTACTTCCACCTGGTGTCTCCGTCTGCATTGGGCCCATGACGTCCGAGTGGATGAGGTCGAGGACTCCAGCACTCTTGACGGTCTTTTCGGGGTTGCGAGAGAAGTTGTCTTCTCGCATCTTGCCCATGCAGCAGCCGGCACACACGTGATCACTTGGCGCATCTGCGATGCGAGGAACCCCATCGGCCATGGTCAGTAGCTGTTCATAGCGCTTGAACGGGATGTGGCCGAGACGGGCATGCACAACTACCCATGGCTCCATACGAGATACCGTCGCCGCATGACACACCTCGCCCCCCACTGTCTTCAACTTGTAGACGTTTCCACAGCGCTTGGCCTCCATGACGGTAGCATCGCCATAGCGAAAGACACACATGTCCTTGCTGAACTGCGCGACGACATCCTTCTCGCCCAGCTTTGCCACCGAGATGAGGCTCCCTTCAACTTCAGGGATGTACAAAACATCCCACAGTGTGACAGACGTCCCGTCCATCAGCTTCAACCCGATGGTGCCCATTGCAACTGCGTAGACCTTCCCATCTGCGATCGTGATGCGGACTGGCGTCTTCAGGTCCTTCATGGGCGCGAACTTGTCCCGGACGCTGGTCAT
Protein sequence:
MTSVRDKFAPMKDLKTPVRITIADGKVYAVAMGTIGLKLMDGTSVTLWDVLYIPEVEGSLISVAKLGEKDVVAQFSKDMCVFRYGDATVMEAKRCGNVYKLKTVGGEVCHAATVSRMEPWVVVHARLGHIPFKRYEQLLTMADGVPRIADAPSDHVCAGCCMGKMREDNFSRNPEKTVKSAGVLDLIHSDVMGPMQTETPGGSTYAVTFIDDFSRHIMVYFMKMKTEVLEKFKMFRADIENATGRKIKCIRSGNGGKYKGRLFKEYLAKQGIRHEKTVPYTPQQNGLAEHMNRSLVQTATTRASTRSGRLKQSTRQWKKAIASELESLIANKSWKLVPKPTHQRPIGCRWVLALKRDDKGQVVRYKARLVAKVYSQRHGIDYEETHSPVAFMNSVRAMLARCGVEGMEIEQCDVDTAFLYGTLEEGVSGRTQGTPGIGRS
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
49061.9 440 9.47 -0.324 32.21
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.