Effector profile
PlantPEAD ID: PlantPEAD28852 Uniprot ID: A0A6A4BGX1 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 129364 Pathogen type: Oomycota
Species: Phytophthora rubi Strain: SCRP333 Other name:
Gene name: NCBI Gene ID: QXFT01005721
Entry name: A0A6A4BGX1_9STRA Protein name: Retrovirus-related Pol polyprotein from transposon TNT 1-94
DOI:
Gene/Protein information
Gene sequence:
ATGATCAGTACCGATGAATCGTCATCGGCTCAACAGAAGGCTTTCGTGGCGAAGAAGAGCTACGACAAGCGTCGGTTCAACGGCAAGTGCTTCTACTGCAAGAAGACTGGGCACAAGGAAACGGAGTGCCGCAAGAAGAAGGCCGACGGGGAACGCGGACAAGTCGCGAGAGAGACATCCGACTACGCGTTCACGGCTACGAGTGCGATGGGCAAGACTGAATGGCTCGTCGACTCCGGTGCAAGCTCGCACATGACCAGCGTCCGGGACAAGTTCGTGTCCATGAAGGAGCTGAAGACGCCAGTCCGCATCACGATCGCGGATGGCAAGAAGATCGACGCAGTTGCAATGGGCACCGTCGGATTGAAGCTGATGGACGGGACGTCTGTCACGCTGTCGGATGTTCTGTACATCCCTGAAGTTGAAGGAAGCCTCATCTCGGTGGCGAAGCTGGCCGAGAAGGACGTCGTCGCGCAGTTCAGCAAGGACAAGTGTGTCTTTCGCTATGGCGATGCTACCGTCATGGAGGCCAAGCGCTGTGGAAACGTCTACAAGTTGAAGACAGTGGGGGACGAGGTGTGTCATGCGGCGACGACATCTCGTAAGGAGCCATGGGCAGTTGTACACGCCCGTCTCGGCCACATCCCGTACAAGCGCTATGAACAGCTATTGACAATGGCCGATGGAGTTCCTCGCATCGCAGATGAGCCAAGTGACCACGTGTGTGCTGGCTGCTGCATGGGCAAGATGCGAGAAGACAACTTCTCTCGCAGCCCCGAAAAGACCGTCAAGAGTGCTGGAGTCCTCGACCTCATCCACTCGGACGTCATGGGCCCGATGCAGACGAAGACACCAGGTGGCTGTACGTACGCTGTCACGTTCATCGACGATTTCTCACGTCACGTCACGGTGTACTTCATGAAGAAGAAAGCGGAAGTTTTGGAGAAGTTCAAGAAGTTCAAGGCCGACATGGAAAATGCTACAGGCCGCAAGATCAAGCGCCTCCGCTCGGACAACGGCGGGGAATACACGGGTCGACTCTTCAAAGAGTACCTGTCCAAGCAAGGCATTCGTCATGAGAAGACAGTGCCGTACACGCCTCAGCAGAATGGACTGGCTGAGCGCATGAACCGGAGCCTCGTGGAGATGGCTCGTTGCATGCTCTACCACGAGGGCATCGACAAGAAGTGGTGGGCTGAAGCAGTCAACACGTCGGCGTGGATCATCAACAGGATTCCCAACACAGTGACTGTGAAGACACCCTACGAGATCGTGTACCAGAAGAAACCTCAGCTCAAGAACCTGAAGGTGTTCGGTGCACTCGGCTATGGGCACATCCCGGACGAGAAGCGCCGCAAGCTCGACGCCAAGGCGTTCAAGTGCCGCTTCTTGGGCTACGAGGATGGTGTCAAGGGATACCGCGTCCTGAATGTGGAAACTGGCCAAGTGAAGATTGTGCGTACGGTGAAGTTCATGGAGACCACTAGCACGGGCGACTTCATGACTGAGGTCGAACGTGACGACAAAGATGAAGATGTTGCCGCGCCTCACGCTACTGCTCCGAGCCGTGGACAGACGCAGACGCTCACGATCTTCAATGATGAGGTGGTACCACTTCAACATGAGGTGACCACAGAGACTGCAATCGTCCCTGCACCTTCTCACCCCATGATTACTCGCTCGC
Protein sequence:
MISTDESSSAQQKAFVAKKSYDKRRFNGKCFYCKKTGHKETECRKKKADGERGQVARETSDYAFTATSAMGKTEWLVDSGASSHMTSVRDKFVSMKELKTPVRITIADGKKIDAVAMGTVGLKLMDGTSVTLSDVLYIPEVEGSLISVAKLAEKDVVAQFSKDKCVFRYGDATVMEAKRCGNVYKLKTVGDEVCHAATTSRKEPWAVVHARLGHIPYKRYEQLLTMADGVPRIADEPSDHVCAGCCMGKMREDNFSRSPEKTVKSAGVLDLIHSDVMGPMQTKTPGGCTYAVTFIDDFSRHVTVYFMKKKAEVLEKFKKFKADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIRHEKTVPYTPQQNGLAERMNRSLVEMARCMLYHEGIDKKWWAEAVNTSAWIINRIPNTVTVKTPYEIVYQKKPQLKNLKVFGALGYGHIPDEKRRKLDAKAFKCRFLGYEDGVKGYRVLNVETGQVKIVRTVKFMETTSTGDFMTEVERDDKDEDVAAPHATAPSRGQTQTLTIFNDEVVPLQHEVTTETAIVPAPSHPMITRS
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
62917.2 561 9.2 -0.515 26.35
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.