Effector profile
PlantPEAD ID: PlantPEAD28892 Uniprot ID: A0A6A4CHR1 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 129364 Pathogen type: Oomycota
Species: Phytophthora rubi Strain: SCRP333 Other name:
Gene name: NCBI Gene ID: QXFT01003320
Entry name: A0A6A4CHR1_9STRA Protein name: Reverse transcriptase Ty1/copia-type domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
GCTGAGCGCATGAACCGGAGCCTCGTGGAGATGGCTCGTTGCATGCTCTACCACGAGGGCATCGACAAGAAGTGGTGGGCTGAAGCAGTCAACACGTCGGCGTGGATCATCAACAGGATTCCCAACACCGTGACTGTGAAGACGCCCTACGAGATCGTGTACCAGAAGAAACCTCAGCTCAAGAACCTGAAGGTGTTCGGTGCACTCGGCTATGGACACATCCCGGACGAGAAGCAGCGCAAGCTCGACGCCAAGGTGTTCGAGTGCCGCTTCTTGGGCTACGAGGATGGTGTCAAGAGATACCGCGTCCTGAATGTGGCAACTGGTCAAGTGAAGATTGTGCGTACGGTGAAGTTCATGGAGACCACTAGCACGGGCGACTTCATGACTGAGATCGAAGGCGACGACAAAGATAGAGATGAAGATGTTGCCGCGCCTCACGCTACTGCTCCGAGTCGTGGACAGTCGCAGACGCTCACCATCTTCAATGATGAGGTAGTACCAATTCAACATGAGGTGACCACAGAGACTGCAATCGTCCCTGCACCTTCTCACTCCATGATTACTCGCTCGCGTACCCGGTACATTGAAGAGACCCGGATCCTGAGGAAGCGGAAGGACGCAAGAAGCATATTGTTTCTCCCTCCGCTATTGGAACAAAGCGCCAGAAGTGAGCTGGAGTCACTCATCGCCAACAAGACCTGGCAGCTGGTACCCAAGCCAGTACACCAGCGCCCGATCGGTTGCCGCTGGGTTGTAGCACTGAAGCGGGACGAAAAGGGACAAGTCATTCGGTACAAGACTCGTCTAGTGGCCAAGGGGTACTCGCAGCGTCACGGCATTGACTATGAAGAAACGTACTCGCAGGTTGCTTACGTCAACTCGGTTCGCGCCATGCTGGCGAAGTGCGGGGCGGAAGGAATGGAGATCGAGCAGTGCGATGTCGACACAGCGTTCCTGTACGAGAAGCTGGAAGAAGAGATCTACATGGAGTTACCGGAAGACCTCAGGTGGTTGCTGGAATTAGCCGAAGCTGGAGACGAGAACGACGTCGTCTGCATGCTGCTCCAGATTTTGTATGGGCACTGTGGTGCTCCTGTGGTATGGCGCTCGACTGTCGCGCTGAGTTCAACCGAGGCCGAATACATGGCACTAAGTGACTGA
Protein sequence:
AERMNRSLVEMARCMLYHEGIDKKWWAEAVNTSAWIINRIPNTVTVKTPYEIVYQKKPQLKNLKVFGALGYGHIPDEKQRKLDAKVFECRFLGYEDGVKRYRVLNVATGQVKIVRTVKFMETTSTGDFMTEIEGDDKDRDEDVAAPHATAPSRGQSQTLTIFNDEVVPIQHEVTTETAIVPAPSHSMITRSRTRYIEETRILRKRKDARSILFLPPLLEQSARSELESLIANKTWQLVPKPVHQRPIGCRWVVALKRDEKGQVIRYKTRLVAKGYSQRHGIDYEETYSQVAYVNSVRAMLAKCGAEGMEIEQCDVDTAFLYEKLEEEIYMELPEDLRWLLELAEAGDENDVVCMLLQILYGHCGAPVVWRSTVALSSTEAEYMALSD
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
44297.7 387 6.02 -0.391 48.77
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.