Effector profile
| PlantPEAD ID: PlantPEAD29090 | Uniprot ID: A0A0P1A565 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 4781 | Pathogen type: Oomycota |
| Species: Plasmopara halstedii | Strain: | Other name: |
| Gene name: | NCBI Gene ID: CCYD01000041 | |
| Entry name: A0A0P1A565_PLAHL | Protein name: Retrovirus-related gag-pol polyprotein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCTTGAGCTGGGGTTCAAGAAGTGTGAGGCCGACCACTGTATCTACGTCAAAAGAAATGACAATAACATGATCTTCGTGGCTCTTTACGTTGATGACTTGGTGATTGCAAGCAACAATAATGGGTTACTCAAGTCAACAAAGAATGCACTCAGCGAGCGTTTTGCTATGACGGATTTGGGCCGACTCAAGTACTTTCTTGGCATCGAGATTGAACAAGATGAGTCTACTGGAAGTGTTTCGATGCGTCAGACCAAGTTTGCAAATGATATTTTGAAGAAGTTCAGCATGGAAAACAGCAATTCAGTCAAGACCCCTCAAGACCCAGGACTCATATTGACCAAGGCTATGTGTGAAGGCGGCTGCAAGCACGAAGAGACAATGATCAATGTACCATATCGCAATGCTGTTTGTTGCCTCATGTACCTAATAGTTAGGACTAGGCCGGACCTCGCCGCTGCTGGGGGAGTTCTTAGCCAATTTGCGACAGATCCGTGTCCTTCACATTGGCAAGCACTCAAGCGTGTGTTTTGTTACATTCAAGGCACCAAGACTTTCGGCATCAAATTTCAGGCAACAAAGTGA
Protein sequence:
MLELGFKKCEADHCIYVKRNDNNMIFVALYVDDLVIASNNNGLLKSTKNALSERFAMTDLGRLKYFLGIEIEQDESTGSVSMRQTKFANDILKKFSMENSNSVKTPQDPGLILTKAMCEGGCKHEETMINVPYRNAVCCLMYLIVRTRPDLAAAGGVLSQFATDPCPSHWQALKRVFCYIQGTKTFGIKFQATK
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21755.2 | 194 | 8.58 | -0.166 | 29.65 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR043502,IPR013103
Pfam: PF07727
SMART:
KEGG:
PRINTS: