Effector profile
PlantPEAD ID: PlantPEAD29214 Uniprot ID: A0A2J8CNQ6 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 27337 Pathogen type: Fungi
Species: Verticillium dahliae Strain: 12008 Other name: Verticillium wilt
Gene name: NCBI Gene ID: MPSH01000069
Entry name: A0A2J8CNQ6_VERDA Protein name: Reverse transcriptase Ty1/copia-type domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
TCACTGGTGGACCGCTGGTACGCACTCCATCTGCAGAAGCTTCACGAAGTTCTGATGCTTCTGAGTCGGGAGAATCTTTGTAAGCCCATCGCTCACTATCTTGTCAGTGCTCATCCAGTCCACGGATATCTTCCCCTGTCTGACTGTTTGTCGGATCCAAAGACGATGGATGTCAACATGCTTGAGCTTCGTAGTGGCTTGAGGCCTCTCACTAGTGAGTAACAGCAGCGTTTGGCGGTTATCACAGAACATCTGGATCGGAACCTTGCCATGAAAACGTAGCTGAAGCTCCTTGATCAGACGAAGAGTGGCAAGGTAGTTCCTCGCTGCGACACTGAGGGCCACCAGCTCAGCTTCGGTGCTAGAAGTGACCACGGATCGCTGCTTTGTAGCTTTCCAGTCAATTGGACCTCCAAAGAGCATGGTGGTGTATCCTTGTGAGCTAAATCTGGTGATGGGATCATCGCCGAATGATGCGTCGCTCGCACAATACAGCGATGTAGAATGGTCTCCTGATCCTCCGTAGGACAGCGAGAGAGTCCTTGTGCGATAGAGGTAGCGGAGACAGTGGTCTGCTGCAAGGTGATGGAGTTCTGTCGGCCTGAGCAGAGACTCCGCAAGTCTTGAGGCAGCTTTGGCCACATCAGGTCGTGTTGTGGTTGCTGCGTAATTGATGGAACCAATTTTGCGTTGGTATAGTTGAATGGATTCAGCAGAGGCTTCGTAATCCTTTGGAGCAGGTGCTGGGTCTGTTGATAGAGGCGTCAAATGACCTCTGGTGGATGGCTGGAGGTTGAGGTCCTTCATCTTTTCAGTGATGTAGTTCTCCAGAGACAGCCAGAGCTTGCGCTGGCTACGATCTCTGACCACTCTGATGCCTAAGAACCATCTGACCTCGCCAAGTTCTCGCATCTCGAACAGAGACTTGAGCTGGCTCTTCAGCTCTTCGGCCGCTTGGCGATCCTCTTTGCGGTTCATGAGGATGATGTCGTCAACGTAGAAGAACATGATCATGCCTCTGCCCATGAAGACACAGTTATCTTCCTCGAGAGCCACGAGGCCGATCTTCCGCATAGCCTCGGACAGCAGCTTGTGCCAGAGAAGCGGTGATCGGCGCAAACCGTACAAAGCTCTCTTCAGCTTGAAAATCGTGCGCCTCTGTGGAGCGCCCTTCTTCTGTTGCATCTCCTGCATGAGATCCCAGCCCTGAGGGGCCCAGACGTAGACTGTCTCGTCGAGGTGTGCATTTGGAAAGGCGTTGACGGCATCCAACTGGTGCGTGTCTAGGTCAAACTCTGCACAGATGGCCATCAACGTTCTGAACGTCTTGGCTGCCAGTGTCGACGCGTATGTTTCCATCTCATTCTTGGGCTGTTGGTCTCCTCGTACGCAGAGCCTGGCCTTGAACTTGGTCACGTAGCCGGTGGAGTCAACCTTGTATTTCCAGACCCAGGTCAACCCGAGAACCTTGTGTATTTCCTGGTCGACCGATTCGAAGGGGACTTGCTCGATTGTGTCCATATTTTCAATGGTGTTGACCTCCTGGACGCTTGCTTCTAGCCACTGCTTTTTGTGATCAGAATGAAGCATCTCCTTCCAGGATCTTGGCTCCGCGGGCAT
Protein sequence:
MPAEPRSWKEMLHSDHKKQWLEASVQEVNTIENMDTIEQVPFESVDQEIHKVLGLTWVWKYKVDSTGYVTKFKARLCVRGDQQPKNEMETYASTLAAKTFRTLMAICAEFDLDTHQLDAVNAFPNAHLDETVYVWAPQGWDLMQEMQQKKGAPQRRTIFKLKRALYGLRRSPLLWHKLLSEAMRKIGLVALEEDNCVFMGRGMIMFFYVDDIILMNRKEDRQAAEELKSQLKSLFEMRELGEVRWFLGIRVVRDRSQRKLWLSLENYITEKMKDLNLQPSTRGHLTPLSTDPAPAPKDYEASAESIQLYQRKIGSINYAATTTRPDVAKAASRLAESLLRPTELHHLAADHCLRYLYRTRTLSLSYGGSGDHSTSLYCASDASFGDDPITRFSSQGYTTMLFGGPIDWKATKQRSVVTSSTEAELVALSVAARNYLATLRLIKELQLRFHGKVPIQMFCDNRQTLLLLTSERPQATTKLKHVDIHRLWIRQTVRQGKISVDWMSTDKIVSDGLTKILPTQKHQNFVKLLQMECVPAVHQ
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
61940.3 539 9.05 -0.405 43.11
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.