Effector profile
| PlantPEAD ID: PlantPEAD30121 | Uniprot ID: A0A329SS08 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 29920 | Pathogen type: Oomycota |
| Species: Phytophthora cactorum | Strain: 4032 | Other name: |
| Gene name: | NCBI Gene ID: RCMG01000037 | |
| Entry name: A0A329SS08_9STRA | Protein name: mRNA splicing factor, Cwf18 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCAGGCTCGGACGTCGACGATGCGATGCCACGCGCCAAGCGGCTGAGGCTGCTGCGTGAGGCCAAAGCCCGCAAAGAGCGCGGCGAGAACAACAACGGAGAAGCAAGCGATCTGGTGGCTGCAGCATTACAGCCCGCGGGGGACGAGCCGATGCAACAGAAGGATGCGTCGGTGCCGGAGGTTCAGGTGGCCAACGTCTCGGCCAATACCGACGCCAAGTCAGAGGACCTGGTGGAGAAGGTGGCGCAGGTGCAGGAAGAGGATGCTAAAACCGAAGACGAGAGTGACGACGAGCTGCTGAACCTCGCGCCCAAGCGCGCCAACTGGGACATGGAGCGGGACATCGCGCCCATGCTGCGCAAGCTGGAGCGGCGGACGCAGCACGCCATCGTCGAGATTCTGCGCGAGAAGCTAGCAGCAGAGCAGCAGGAGGAAGATAGTAACGACGACGATGAGGAGGAGAACGAGGAGGTAGATGAATAG
Protein sequence:
MAGSDVDDAMPRAKRLRLLREAKARKERGENNNGEASDLVAAALQPAGDEPMQQKDASVPEVQVANVSANTDAKSEDLVEKVAQVQEEDAKTEDESDDELLNLAPKRANWDMERDIAPMLRKLERRTQHAIVEILREKLAAEQQEEDSNDDDEEENEEVDE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18065.6 | 161 | 4.31 | -1.107 | 53.35 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013169
Pfam: PF08315
SMART:
KEGG:
PRINTS: