Effector profile
| PlantPEAD ID: PlantPEAD30146 | Uniprot ID: A0A5C3EK56 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 86804 | Pathogen type: Fungi |
| Species: Ustilago trichophora | Strain: NBRC100155 | Other name: |
| Gene name: | NCBI Gene ID: OOIN01000033 | |
| Entry name: A0A5C3EK56_9BASI | Protein name: Probable Coiled-coil domain-containing protein 12 (CCDC12) | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTACTCGTCTTCACTCTCGCTCTCGTCATCCGACGACTCCCCGTCCTCACCTTGGCCCAAATCAGCTGTTGCACTAGCGACGATCTCCGCGCTGACTCCCGCTACACTTTCTTCCGACCTCACTGCCCCATTCGCATCCAACCCAGCAGCCTTCTGTTGGCCCTGAATCCTTTGCCTAATCAGCAGAATGACCGCCTCCTTGTCCCTTCTCTCCATTTTTTTCAGCCTCTTCTCCAGATCCCGCTTGAGATCCCAGTTGGGTCGTTTGGGAGCGATGTTTGTCAGATCAAGATCTTCCTTGCGTCTCTGTTCGTCTAGTGCGATGGTGTCGGATTGGAGTGTAGAGACGTCCTTTTCCACTGTATCGGGGAGATCGCGTGCGGAAGTGAAACGTTTGAATTGGCCTGTTAAAGGGTCGTAGTTGCGGAAATGGCGCTTGATTAGGGACGAGGAAGAGGGAGAAAGAGTGCCGGTGGATTCTTCGTGACGTCGCTTGCGAAGCAGGGCAAGCTTTTGCTTGCGCGCTGCGGAAAACGCTTCCATTGACAT
Protein sequence:
MSMEAFSAARKQKLALLRKRRHEESTGTLSPSSSSLIKRHFRNYDPLTGQFKRFTSARDLPDTVEKDVSTLQSDTIALDEQRRKEDLDLTNIAPKRPNWDLKRDLEKRLKKMERRDKEAVILLIRQRIQGQQKAAGLDANGAVRSEESVAGVSAEIVASATADLGQGEDGESSDDESESEDE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20414.7 | 182 | 5.61 | -0.926 | 69.17 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013169
Pfam: PF08315
SMART:
KEGG:
PRINTS: