Effector profile
| PlantPEAD ID: PlantPEAD30151 | Uniprot ID: A0A2J8DNE1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 27337 | Pathogen type: Fungi |
| Species: Verticillium dahliae | Strain: 12008 | Other name: Verticillium wilt |
| Gene name: | NCBI Gene ID: MPSH01000003 | |
| Entry name: A0A2J8DNE1_VERDA | Protein name: Cwf18 pre-mRNA splicing factor | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCCAGTTCGCACACCAGCCTCAGCGCAGCGGCCGACGACCGCAAAGCGCGACTCGCCAAGTTCAAGAACCTGAAGAGGAAGCAGCCCATCGACGAAGTCGCCGCCCCAGAGTCCGAACGCTCGTCGGCACCACCAGAAGAACCCGACGTCGCCAAACTGCACCTGTCCGGACGCAACTATGACCCCGAAACCCGCGGACCAAAGCTCGGTTTCGAGGCACCGCCGATACAAGACCTCGACAAGCCGACGCTGGAGGAGCAGGCAGCGGAGGTCGAGGCAGAAGTGAAGCGCAAAGCGGCCGAAGACGCGGCTGACGACAAGGGAATCGACCTGTTTAAACTCCAACCAAAAAAGCCGAACTGGGACCTGAAGAGGGATCTGGACAAAAAGTTGGAAATACTCAATGTGAGAACAGACAACGCCATCGCCAAGCTGGTACGAGAGAGGATCGCAAACGCACAAAAGGCCGAAATCAAGTCCAAAGAAGCCGGAGTGGAGGGCGCGGAAGGCGATGCGACGGGAATTGACGGCATCGCATTGGTGGAAGGAGTGCGCGTTCGAGAGCGAGAAGAGGAGGAAGAGGAGCGTAGGGAGAGGGAGGCTGACGAAACGGATGTATGA
Protein sequence:
MSSSHTSLSAAADDRKARLAKFKNLKRKQPIDEVAAPESERSSAPPEEPDVAKLHLSGRNYDPETRGPKLGFEAPPIQDLDKPTLEEQAAEVEAEVKRKAAEDAADDKGIDLFKLQPKKPNWDLKRDLDKKLEILNVRTDNAIAKLVRERIANAQKAEIKSKEAGVEGAEGDATGIDGIALVEGVRVREREEEEEERREREADETDV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 22998.6 | 207 | 4.96 | -0.995 | 44.84 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013169
Pfam: PF08315
SMART:
KEGG:
PRINTS: